Pairwise Alignments

Query, 273 a.a., helix-turn-helix transcriptional regulator from Rhodopseudomonas palustris CGA009

Subject, 265 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  136 bits (342), Expect = 5e-37
 Identities = 80/229 (34%), Positives = 118/229 (51%), Gaps = 2/229 (0%)

Query: 41  HCHAKGQIMLVQRGALSCRVDGGLWIVPPRSAVWIPGGALHAIRATGRLEGYSAFVA--A 98
           H H +GQ      GAL    D G W+VPP+ A+W+PGG  H +   G +   + ++   A
Sbjct: 33  HTHRRGQFAYASTGALKMFTDLGNWVVPPQRAIWVPGGISHEMHMRGDVVMLNTYLNDDA 92

Query: 99  GIDVGLPQRCCAVSVTPLLRELLFRAARLPLLYDQDAATSRLIAVLLDEIAAARIEDLHL 158
               GL   C    V+PLLR LL  A  +            ++ +L+DEI A     L  
Sbjct: 93  AQRAGLQDYCQVFGVSPLLRHLLEAALAIGPSASPSVRDRCVLTLLIDEIGAMPELPLSA 152

Query: 159 PMPSDPRLRALADLMMAAPAERGSLEGWAARAGLSERTLGRLISRETGMSFGRWRQQLGV 218
           P+PS+ RL       + AP ++ S+   A  + +S RT  R     TGM+F  WRQQ+ +
Sbjct: 153 PLPSEARLARSCQRFLEAPTQKISICEMADWSSMSRRTFTRNFRECTGMTFVSWRQQVCL 212

Query: 219 MLAVQWLAGGASIQQVAADLGYESVPSFVTMFRKTLGTSPGRYMAERYA 267
           + A   L+ G+SI  VA +LG+ S  +F ++FR+ LG SP RY+A+  A
Sbjct: 213 LEATARLSHGSSITDVAFELGFSSSSAFTSVFRRNLGDSPARYLAKSKA 261