Pairwise Alignments

Query, 273 a.a., helix-turn-helix transcriptional regulator from Rhodopseudomonas palustris CGA009

Subject, 271 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  154 bits (390), Expect = 1e-42
 Identities = 84/253 (33%), Positives = 138/253 (54%), Gaps = 2/253 (0%)

Query: 10  ASDWVEPDEVARPVVAYGMASAMIGSFQLDMHCHAKGQIMLVQRGALSCRVDGGLWIVPP 69
           + D+++  +V R ++A  + +   G++    H H  GQ++    G +     G LW +PP
Sbjct: 18  SEDYLDYQDVPRVLMAL-VRNQAAGAYNAP-HTHRHGQLLYAVSGVMRAVAQGSLWFLPP 75

Query: 70  RSAVWIPGGALHAIRATGRLEGYSAFVAAGIDVGLPQRCCAVSVTPLLRELLFRAARLPL 129
           + A+WIP    H       ++  S ++ A    G   RC  V V+ LLREL+   A  P+
Sbjct: 76  KRALWIPAEEEHDQLMLTPVQMRSIYIQADAAAGFGDRCRIVDVSLLLRELILVLANEPI 135

Query: 130 LYDQDAATSRLIAVLLDEIAAARIEDLHLPMPSDPRLRALADLMMAAPAERGSLEGWAAR 189
            Y+ +   S ++A++L E+AAAR   L +P P D RL  +   ++ AP +   +E WA +
Sbjct: 136 EYELEGRNSHVVALILSELAAARTLPLQIPWPVDRRLLVVCRAILEAPGQTHRVEYWADQ 195

Query: 190 AGLSERTLGRLISRETGMSFGRWRQQLGVMLAVQWLAGGASIQQVAADLGYESVPSFVTM 249
            G S RTL RL  +ETG+++ +W QQ+ +  A++ L  G  I ++A DLGY S  +F  M
Sbjct: 196 VGASSRTLIRLFLKETGLTYRQWVQQVRLACALERLENGEPIGRIAQDLGYVSASAFSAM 255

Query: 250 FRKTLGTSPGRYM 262
           FR+ +G SP  ++
Sbjct: 256 FRRAIGVSPRDFL 268