Pairwise Alignments

Query, 273 a.a., helix-turn-helix transcriptional regulator from Rhodopseudomonas palustris CGA009

Subject, 236 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  146 bits (369), Expect = 4e-40
 Identities = 85/218 (38%), Positives = 127/218 (58%), Gaps = 9/218 (4%)

Query: 41  HCHAKGQIMLVQRGALSCRVDGGLWIVPPRSAVWIPGGALHAIRATGRLEGYSAFVAAGI 100
           HCHA+ Q++    G +    +GG W++P   A+W+P G  HAIR  G +   +  + A I
Sbjct: 17  HCHAEDQLIYAASGVMRVSSEGGSWVIPGGHALWMPAGVSHAIRMKGVVCMRTLLLDAHI 76

Query: 101 DVGLPQRCCAVSVTPLLRELLFRAARLPLLYDQDAATSRLIAVLLDEIAAARIEDLHLPM 160
           +     RC  + V+ LLREL+  A+R+  L  +D A +R  A++L E+AAAR  D  +P 
Sbjct: 77  E-----RCQVIVVSGLLRELILAASRVLNL--RDGAHAR--ALILYELAAARRIDAFVPT 127

Query: 161 PSDPRLRALADLMMAAPAERGSLEGWAARAGLSERTLGRLISRETGMSFGRWRQQLGVML 220
           P   RLRA  +  +  PA+  +LE   A+  +S R++ RL  RE GMS+G+WR +  VML
Sbjct: 128 PQHARLRAWCERFLQDPAQDLTLEQCGAQLNMSARSVARLFQREVGMSYGQWRARARVML 187

Query: 221 AVQWLAGGASIQQVAADLGYESVPSFVTMFRKTLGTSP 258
           + Q LA G  I  VA + GY+S  +F  MF++ LG +P
Sbjct: 188 SQQCLADGKPILNVALEHGYQSASAFTAMFKRILGHAP 225