Pairwise Alignments

Query, 273 a.a., helix-turn-helix transcriptional regulator from Rhodopseudomonas palustris CGA009

Subject, 273 a.a., putative DNA-binding transcriptional regulator from Escherichia coli BL21

 Score =  202 bits (515), Expect = 5e-57
 Identities = 106/249 (42%), Positives = 150/249 (60%), Gaps = 2/249 (0%)

Query: 15  EPDEVARPVVAYGMASAMIGSFQLDMHCHAKGQIMLVQRGALSCRVDGGLWIVPPRSAVW 74
           EPD      VA+ +  A        +H H KGQ++L   GA++C V+  LW+VPP+ AVW
Sbjct: 11  EPDRHHEAAVAFCI-HAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVW 69

Query: 75  IPGGALHAIRATGRLEGYSAFVAAGIDVGLPQRCCAVSVTPLLRELLFRAARLPLLYDQD 134
           IPGG  H+ + T   E    F+     V +P  CC + ++PL REL+   A        +
Sbjct: 70  IPGGVEHSNQVTANAELCFLFIEPSA-VTMPTTCCTLKISPLCRELILTLANRTTTQRAE 128

Query: 135 AATSRLIAVLLDEIAAARIEDLHLPMPSDPRLRALADLMMAAPAERGSLEGWAARAGLSE 194
             T RLI VL DE+     + LHLP+ S P++RA+ ++M   P E GSL  WA    +SE
Sbjct: 129 PMTRRLIHVLFDELPQQPQQQLHLPVSSHPKIRAMVEMMAKEPVEWGSLGQWAGFFAMSE 188

Query: 195 RTLGRLISRETGMSFGRWRQQLGVMLAVQWLAGGASIQQVAADLGYESVPSFVTMFRKTL 254
           R L RLI +ETG+SF +WRQQL +++A+Q L  G ++Q+VA  LGY+S  +F+TMF+K L
Sbjct: 189 RNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGL 248

Query: 255 GTSPGRYMA 263
           G +PGRY+A
Sbjct: 249 GQTPGRYIA 257