Pairwise Alignments

Query, 641 a.a., sigma 54-interacting transcriptional regulator from Rhodopseudomonas palustris CGA009

Subject, 687 a.a., Formate hydrogenlyase transcriptional activator from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  306 bits (783), Expect = 3e-87
 Identities = 177/347 (51%), Positives = 223/347 (64%), Gaps = 11/347 (3%)

Query: 290 ALAEVDRLRERLQLENDYLQEEIR-IETNPRGIIGQSEAIQTTLRQVKLVAPTAATVLIT 348
           A  E+ RL+ERL  EN  L E++  +++    IIG+SEA+   L+QV++VA + +TVLI 
Sbjct: 344 AYQEIHRLKERLVDENLALTEQLNNVDSEFGEIIGRSEAMYNVLKQVEMVAQSDSTVLIL 403

Query: 349 GESGTGKELIARAIHEASTRRDRPLIRVNCAAIPRELFESEFFGHARGAFTGAVRDRIGR 408
           GE+GTGKELIARAIH  S R  R ++++NCAA+P  L ES+ FGH RGAFTGA   RIGR
Sbjct: 404 GETGTGKELIARAIHNLSGRSGRRMVKMNCAAMPAGLLESDLFGHERGAFTGASAQRIGR 463

Query: 409 FELADGGTLFLDEVGEIPLELQSKLLRVLQEGNFERVGEERTRNVDVRLIAATNRDLKRE 468
           FELAD  +LFLDEVG++PLELQ KLLRVLQE  FER+G  +    DVRLIAATNRDLK+ 
Sbjct: 464 FELADKSSLFLDEVGDMPLELQPKLLRVLQEQEFERLGSNKLIQTDVRLIAATNRDLKKM 523

Query: 469 VQRGHFREDLYFRLSVFPIESVPLRDRREDIPLLAQHFLTNEARELKTEL-RLSQGDVRR 527
           V    FR DLY+RL+VFPI+  PLR+R EDIPLL + F    AR +   +  +    +R 
Sbjct: 524 VADREFRNDLYYRLNVFPIQLPPLRERPEDIPLLVKAFTFKIARRMGRNIDSIPAETLRT 583

Query: 528 LMRYDWPGNVRELQNVIERATILAQNGRLRLDLPESAGSHASATSGRQKPDARPVVMTVA 587
           L   +WPGNVREL+NV+ERA +L +   L+L LP+              PD  PV     
Sbjct: 584 LSSMEWPGNVRELENVVERAVLLTRGNVLQLSLPDITA---------VTPDTSPVATESD 634

Query: 588 DLRNLERDNIIAALRACKGKVFGDDGAAAMLDMKPTTLASRIKALGI 634
                E   II  L+   G V G  GAA  L +K TTL SR+K LGI
Sbjct: 635 KEGEDEYQLIIRVLKETNGVVAGPKGAAQRLGLKRTTLLSRMKRLGI 681