Pairwise Alignments

Query, 641 a.a., sigma 54-interacting transcriptional regulator from Rhodopseudomonas palustris CGA009

Subject, 441 a.a., Response regulator of zinc sigma-54-dependent two-component system from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  259 bits (662), Expect = 2e-73
 Identities = 159/345 (46%), Positives = 211/345 (61%), Gaps = 22/345 (6%)

Query: 293 EVDRLRERLQLENDYLQE---EIRIETNPR-GIIGQSEAIQTTLRQVKLVAPTAATVLIT 348
           + DRL+E L+    + +E   E+   +  + G+IG S A+Q  L ++ +VAP+ ATVLI 
Sbjct: 109 DFDRLQETLEKALAHTRETGAELPSASAAQFGMIGSSPAMQHLLNEIAMVAPSDATVLIH 168

Query: 349 GESGTGKELIARAIHEASTRRDRPLIRVNCAAIPRELFESEFFGHARGAFTGAVRDRIGR 408
           G+SGTGKEL+ARA+H  S R DRPL+ +NCAA+   L ESE FGH +GAFTGA + R GR
Sbjct: 169 GDSGTGKELVARALHACSARSDRPLVTLNCAALNESLLESELFGHEKGAFTGADKRREGR 228

Query: 409 FELADGGTLFLDEVGEIPLELQSKLLRVLQEGNFERVGEERTRNVDVRLIAATNRDLKRE 468
           F  ADGGTLFLDE+G+I   +Q +LLR +QE   +RVG  +T +VDVRLIAAT+RDL  E
Sbjct: 229 FVEADGGTLFLDEIGDISPLMQVRLLRAIQEREVQRVGSNQTISVDVRLIAATHRDLAEE 288

Query: 469 VQRGHFREDLYFRLSVFPIESVPLRDRREDIPLLAQHFLTNEA-RELKTELRLSQGDVRR 527
           V  G FR+DLY+RL+V  IE   LR RREDIPLLA HFL   A R  K     +   +  
Sbjct: 289 VSAGRFRQDLYYRLNVVAIEMPSLRQRREDIPLLADHFLRRFAERNRKVVKGFTPQAMDL 348

Query: 528 LMRYDWPGNVRELQNVIERATILAQN---GRLRLDLPESAGSHASATSGRQKPDARPVVM 584
           L+ YDWPGN+REL+N IERA +L          L L  +A    +  SG  +P       
Sbjct: 349 LIHYDWPGNIRELENAIERAVVLLTGEYISERELPLAIAATPIKTEYSGEIQP------- 401

Query: 585 TVADLRNLERDNIIAALRACKGKVFGDDGAAAMLDMKPTTLASRI 629
               L ++E++ I+AAL    G       AA  L +   TL +++
Sbjct: 402 ----LVDVEKEVILAALEKTGG---NKTEAARQLGITRKTLLAKL 439