Pairwise Alignments

Query, 1040 a.a., CusA/CzcA family heavy metal efflux RND transporter from Rhodopseudomonas palustris CGA009

Subject, 1053 a.a., cation efflux system protein from Pseudomonas putida KT2440

 Score =  627 bits (1616), Expect = 0.0
 Identities = 373/1053 (35%), Positives = 599/1053 (56%), Gaps = 32/1053 (3%)

Query: 3    RLVELAVNRRFLMLALFLLVLAGGVAAFEHLNIEAYPDPTPPMVDIVTQSPGLSAEEIER 62
            R++  A+ +R +++   L++   G+ +++ L I+A PD T   V I T +PG S  E E+
Sbjct: 4    RIIRFAIEQRIVVMIAVLIMAGIGIYSYQKLPIDAVPDITNVQVQINTAAPGYSPLETEQ 63

Query: 63   YITIPIETQVAGIKNLKTIRTISLYGLSDVKLQFSFDYTYQQALQQVLNRLSQLPP--LP 120
             IT P+ET +AG+  L+  R++S  GLS V + F  D T     +Q++N   Q+    LP
Sbjct: 64   RITFPVETAMAGLPGLQQTRSLSRSGLSQVTVIFK-DGTDIFFARQLINERLQVAKEQLP 122

Query: 121  GNVQPGISPLSP-IGEIFRYRLVGPPG--------YSVLDLKTLQDWVLQRRFRAIPGVI 171
              V+  + P+S  +GEIF + +    G        Y+  DL+ +QDW+++ + R +PGV 
Sbjct: 123  EGVEAVMGPVSTGLGEIFLWTVEAEDGAVKEDGTPYTPTDLRVIQDWIIKPQLRNVPGVA 182

Query: 172  DVTGWGGKTKTYEVQVDFNKLIAYGLTLPQVLQAVSNSNINVGGNTVDIGAQSAVVRGVG 231
            ++   GG  K + V  D  +L  Y LTL  ++ A+ ++N NVG   ++   +  ++R  G
Sbjct: 183  EINTIGGYAKQFLVAPDPKRLATYKLTLNDLVAALESNNANVGAGYIERNGEQLLIRAPG 242

Query: 232  LIRSLDDLANTMVVSNNGNPVLVKDVAKVSVAEKPRLGIAGINNDDDIVQGIVLMRRGEQ 291
             + +++D+AN ++ S +G P+ +  VA VS+ ++ R G A   N  ++V G V M  GE 
Sbjct: 243  QVGNIEDIANIVITSVDGAPIRISSVADVSIGKELRTG-AATENGREVVLGTVFMLIGEN 301

Query: 292  SSPTIARVEQAVTKINASGVLPPGVRIERIYDRKDLIDTTTHTVLHNMVVGILLIVLLQW 351
            S      V   +  IN +  LP GV    +YDR +L++    TV  N+V G +L++ + +
Sbjct: 302  SRTVSQAVAAKLADINRT--LPKGVVAVTVYDRTNLVEKAIATVKKNLVEGAILVIAILF 359

Query: 352  IFLGDLRSALIVGATIPFALFFAVIILVLRGESANLLSVGAIDFGLIVDATVIMVEAIFR 411
            +FLG++R+ALI    IP ++ F    +     SANL+S+GA+DFG+IVD  V++VE   R
Sbjct: 360  LFLGNIRAALITAMVIPLSMLFTFTGMFNNKVSANLMSLGALDFGIIVDGAVVIVENAIR 419

Query: 412  RLSHTTVLSPEERSQISADTIMGMKKHAIRSAAADVSRSIFFAAAIIIAAFLPLFTLSGV 471
            RL+H    +  +  ++   T    + H + +AA +  R + F   II+  +LP+F L+GV
Sbjct: 420  RLAH----AQHKHGRMLTKT---ERFHEVFAAAREARRPLIFGQLIIMVVYLPIFALTGV 472

Query: 472  EGNIFGPMARTYAYALAGGLLATFTVTPALSAIILPHHVQETETWLMRMLHKVYTPWLGW 531
            EG +F PMA T   AL G ++ + T  PA  A+ +   V+E E  +MR     Y P L W
Sbjct: 473  EGKMFHPMAFTVVMALLGAMVLSVTFVPAAIAMFVTGKVKEEEGVVMRTARLRYEPVLQW 532

Query: 532  AVKNRPVVMAGAAGLVLTTVIATRFLGLEFLPKLEEGNLWIRATLPPTISLTEGNGYVND 591
             + +R +  + A  LV+ + +    +G EF+P L EG+  ++A   P  SLT+       
Sbjct: 533  VLGHRNIAFSAAVALVVLSGLLASRMGSEFIPSLSEGDFAMQAMRVPGTSLTQSVEMQQR 592

Query: 592  MRK-LIAGFPEVESVVSQHGRPDDGTDAAGFFNAEFFAPLKPASQWPG-SHDKDELTARM 649
            + K +IA  PEVE + ++ G  +  +D      ++ +  LKP  QWP     +DEL A +
Sbjct: 593  LEKAVIAQVPEVERMFARSGTAEIASDPMPPNASDAYIMLKPQDQWPNPKKPRDELIAEV 652

Query: 650  LKQLQAKFPGVEFNFSQYLQDNVSEAVSGVKGENSIKLYGNDLQALTDTANKIKAVLSTV 709
             K   A  PG  +  SQ +Q   +E +SGV+ + ++K++G+D+  L +TANKI A L  V
Sbjct: 653  QKAA-AGVPGSNYELSQPIQLRFNELISGVRSDVAVKVFGDDMDVLNNTANKIAAALKAV 711

Query: 710  QGVQDLAVFTSLGQPTIQIDVNRARAARYGLTPGDINATIKVAIGGDSAGDLYEPGSDRH 769
             G  ++ V  + G P + I+++R +AARYGL   D+  +I +A+GG  AG LYE   DR 
Sbjct: 712  PGSSEVKVEQTSGLPVLTINIDREKAARYGLNIADVQNSIAIAVGGRQAGTLYE--GDRR 769

Query: 770  FPIIVRLAPEYRKSAEAIHNLRIGV-----QGPNGITQIPLSELADIQLVSGAAYIYRED 824
            F ++VRL    R     + +L I V     QG N I  IPLS++A++ L  G   I RE+
Sbjct: 770  FDMVVRLPETVRTDVAGMSSLLIPVPANAAQGANQIGFIPLSQVANLDLQLGPNQISREN 829

Query: 825  QERYLPIKFSVRERDLGSAIREAQEKVNAQVQLPPGSRMEWVGEFGNLQDAIKRLSIVVP 884
             +R + +  +VR RDLGS + EA   ++ +VQ+P G    W G+F  LQ A KRL IVVP
Sbjct: 830  GKRLVIVSANVRGRDLGSFVEEATASLDKKVQIPAGYWTTWGGQFEQLQSAAKRLQIVVP 889

Query: 885  ISLALIGALLFFNFGSLTDTLLAMSVIPMAIFGGVMGLLVSGIPFSVSAAIGFIALFGIA 944
            ++L L+  LLF  F +L D +L  + IP A+ GGV+ L +  IP S+SA +GFIAL G+A
Sbjct: 890  VALLLVMTLLFLMFNNLKDGMLVFTGIPFALTGGVVALWLRDIPLSISAGVGFIALSGVA 949

Query: 945  VMDGIIILSQYNQLIDQGLDRLRAVVRTGELQLRPVLMTCVIAGVGLLPAAMSTGIGSQV 1004
            V++G+++++    L ++G    +AV      +LRPVLMT ++A +G +P A++TG G++V
Sbjct: 950  VLNGLVMIAFIRGLREEGRTLRQAVDEGALTRLRPVLMTALVASLGFIPMALATGTGAEV 1009

Query: 1005 QKPLAIVVVTGMMLAPGVILITLPVLISYFSRR 1037
            Q+PLA VV+ G++ +  + L+ LP L  +  R+
Sbjct: 1010 QRPLATVVIGGILSSTALTLLVLPALYHWAHRK 1042