Pairwise Alignments

Query, 1040 a.a., CusA/CzcA family heavy metal efflux RND transporter from Rhodopseudomonas palustris CGA009

Subject, 1066 a.a., Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  660 bits (1704), Expect = 0.0
 Identities = 386/1053 (36%), Positives = 606/1053 (57%), Gaps = 31/1053 (2%)

Query: 3    RLVELAVNRRFLMLALFLLVLAGGVAAFEHLNIEAYPDPTPPMVDIVTQSPGLSAEEIER 62
            R++  A+ +R+L++   L ++  GV  F+ L+I+A PD T   V I T +PG S  E E+
Sbjct: 4    RIIRFAIEQRWLVMLAVLGMVGLGVYNFQRLSIDAVPDITNVQVQINTAAPGYSPLETEQ 63

Query: 63   YITIPIETQVAGIKNLKTIRTISLYGLSDVKLQFSFDYTYQQALQQVLNRLSQ--LPPLP 120
             +T PIET +AG+  L+  R+IS YG+S V + F  D T     +Q++N   Q  +  LP
Sbjct: 64   RVTFPIETVMAGLPGLQQTRSISRYGISQVTVVFK-DGTDIYFARQLVNERMQGAVSSLP 122

Query: 121  GNVQPGISPLSP-IGEIFRYRLVGPPG--------YSVLDLKTLQDWVLQRRFRAIPGVI 171
              V P + P+S  +GEIF + +    G        Y+  DL+ +QDW+++ + R +PGV 
Sbjct: 123  EGVHPAVGPISSGLGEIFLWTVEAEEGAKNADGKPYTPTDLRVIQDWIIKPQLRNVPGVT 182

Query: 172  DVTGWGGKTKTYEVQVDFNKLIAYGLTLPQVLQAVSNSNINVGGNTVDIGAQSAVVRGVG 231
            ++   GG  + ++V     +L+AYGLTLP V+QA+  +N NVG   ++   +  ++R  G
Sbjct: 183  EINSIGGFERQFQVAPIPERLLAYGLTLPDVVQALERNNANVGAGYIERRGEQYLIRAPG 242

Query: 232  LIRSLDDLANTMVVSNNGNPVLVKDVAKVSVAEKPRLGIAGINNDDDIVQGIVLMRRGEQ 291
             + SL+DL N ++ +N+G PV ++DVA+V + +  R G A  +N  ++V G V M  GE 
Sbjct: 243  QVGSLEDLRNVVLANNSGTPVRIRDVAEVDIGQDLRTG-AATDNGREVVLGTVFMLLGEN 301

Query: 292  SSPTIARVEQAVTKINASGVLPPGVRIERIYDRKDLIDTTTHTVLHNMVVGILLIVLLQW 351
            S      V + + +IN +  LP GV    +YDR  L+D    TV  N+  G +L++ + +
Sbjct: 302  SRTVAQAVAKKMEEINQN--LPEGVHAITVYDRTVLVDKAISTVKKNLFEGAVLVIAVLF 359

Query: 352  IFLGDLRSALIVGATIPFALFFAVIILVLRGESANLLSVGAIDFGLIVDATVIMVEAIFR 411
            +FLG++R+AL+    IP ++ F    +V +  SANL+S+GA+DFG+IVD  V++VE   R
Sbjct: 360  LFLGNIRAALLTALVIPLSMLFTFTGMVNQKVSANLMSLGALDFGIIVDGAVVIVENCIR 419

Query: 412  RLSHTTVLSPEERSQISADTIMGMKKHAIRSAAADVSRSIFFAAAIIIAAFLPLFTLSGV 471
            RL+H      +ER           + H + +A+ +  R + +   II+  +LP+F L+GV
Sbjct: 420  RLAHA-----QERH--GRPLTKAERFHEVFAASQEARRPLLYGQLIIMVVYLPIFALTGV 472

Query: 472  EGNIFGPMARTYAYALAGGLLATFTVTPALSAIILPHHVQETETWLMRMLHKVYTPWLGW 531
            EG +F PMA T   AL G ++ + T  PA  A+ + ++V E E  LM    + Y P L  
Sbjct: 473  EGKMFHPMALTVVIALLGAMILSITFIPAAVAMFIGNNVGEKENRLMGWARRAYHPLLKR 532

Query: 532  AVKNRPVVMAGAAGLVLTTVIATRFLGLEFLPKLEEGNLWIRATLPPTISLTEGNGYVND 591
            A+  R VV+  AA  VL + +    LG EF+P L EG+  I+A   P  SL++       
Sbjct: 533  AMGARAVVLTAAAVAVLLSGLLATRLGSEFIPSLNEGDFAIQALRIPGTSLSQSVQMQQQ 592

Query: 592  M-RKLIAGFPEVESVVSQHGRPDDGTDAAGFFNAEFFAPLKPASQWPGSHDKDELTARML 650
            + R L+A FPEVE V ++ G  +  +D      ++ +  LKP  QWP            +
Sbjct: 593  IERTLVAEFPEVERVFARTGTAEIASDLMPPNISDAYVMLKPEDQWPSPKRTRRELVEAV 652

Query: 651  KQLQAKFPGVEFNFSQYLQDNVSEAVSGVKGENSIKLYGNDLQALTDTANKIKAVLSTVQ 710
            ++  +K PG  + FSQ +Q   +E +SGV+ + ++K++G+D+  L  TA +I  VL ++ 
Sbjct: 653  QERVSKIPGNNYEFSQPIQLRFNELISGVRADVAVKVFGDDMDVLNKTAQEIAEVLGSIN 712

Query: 711  GVQDLAVFTSLGQPTIQIDVNRARAARYGLTPGDINATIKVAIGGDSAGDLYEPGSDRHF 770
            G  ++ V  + G P + I+++R++AARYG+  GDI  TI  AIGG +AG L+E   DR F
Sbjct: 713  GASEVNVEQTTGLPMLSINIDRSKAARYGVNVGDIQDTIATAIGGRNAGTLFE--GDRRF 770

Query: 771  PIIVRLAPEYRKSAEAIHNLRIGV------QGPNGITQIPLSELADIQLVSGAAYIYRED 824
             I+VRL    R   E+I  L + +       G   ++ IPLSELA + L  G   + RED
Sbjct: 771  DIVVRLPERMRGDLESIRRLPVTLPAATQADGSTRVSFIPLSELATLDLAPGPNQVSRED 830

Query: 825  QERYLPIKFSVRERDLGSAIREAQEKVNAQVQLPPGSRMEWVGEFGNLQDAIKRLSIVVP 884
             +R + +  +VR RDLGS + EA   +  +V +P G    W G+F NLQ A KRL IVVP
Sbjct: 831  GKRRIVVSTNVRGRDLGSFVEEAGAALKEKVVIPTGYWTTWGGQFENLQSATKRLQIVVP 890

Query: 885  ISLALIGALLFFNFGSLTDTLLAMSVIPMAIFGGVMGLLVSGIPFSVSAAIGFIALFGIA 944
            ++L L+  LLF  FG++ D L+  + IP A+ GG++ L +  IP S+SAA+GFIAL G+A
Sbjct: 891  VALLLVFVLLFAMFGNVRDGLIVFTGIPFALTGGILALWLRDIPLSISAAVGFIALSGVA 950

Query: 945  VMDGIIILSQYNQLIDQGLDRLRAVVRTGELQLRPVLMTCVIAGVGLLPAAMSTGIGSQV 1004
            V++G++++S    L + G     A+      +LRPVLMT ++A +G +P A++TG G++V
Sbjct: 951  VLNGLVMISFIRNLREGGATLDDAIFEGALTRLRPVLMTALVASLGFVPMAIATGTGAEV 1010

Query: 1005 QKPLAIVVVTGMMLAPGVILITLPVLISYFSRR 1037
            Q+PLA VV+ G++ +  + L+ LPVL     RR
Sbjct: 1011 QRPLATVVIGGILSSTALTLLVLPVLYRLVYRR 1043