Pairwise Alignments

Query, 394 a.a., ABC transporter substrate-binding protein from Rhodopseudomonas palustris CGA009

Subject, 400 a.a., Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

 Score =  126 bits (317), Expect = 1e-33
 Identities = 97/371 (26%), Positives = 174/371 (46%), Gaps = 22/371 (5%)

Query: 2   FVGLTIPLTGVFSGDGGDLKLGYELAIAQINAGSDIAQKWGLKGKGVLGRQIRHKVSDTE 61
           F GL   ++G F+  G    +G  LAIA+                 +LG  +++KV DTE
Sbjct: 34  FYGLK-SMSGAFASYGKYADMGSRLAIAE--------------HPQLLGHPLKYKVIDTE 78

Query: 62  GKPNLDVQSATQFIQRDKAIMVSGSVSSSSAIALEELGSREKVLYMVGIAGSNDITGKNC 121
           G     V+   + I +D A    G   SSSA+A+ +   +   ++M  + G+++ITGK+C
Sbjct: 79  GNAGKAVRKVQEAIGQDGARFFQGCTLSSSALAVSKEIHKAGGVFMTPV-GADEITGKDC 137

Query: 122 QRYGFRSQQNAYMAAKGLAPVVAKALGKNIKMAFLVPDYTYGHSVYDSFSKFATEQGWKQ 181
               FR     Y A +     +++ L +  +   + P Y +G ++ D+  K   E G + 
Sbjct: 138 NASTFRWSVPTYGAIRETLVPMSRQLPQAKRWYTITPQYVFGDALLDNARKVFAELGVEH 197

Query: 182 VAKEVVPLGTTDYSSALLNIANSGADVFVNIAFGADSVASTKQAEQFGVLKRMK-LVVPN 240
           +      L   ++S  L N   +  DV V + FG+ +  + +QA  FG+  RMK L+V +
Sbjct: 198 IGNSYHSLQEQEFSGYLTNAIAAKPDVLVLLNFGSQASNALRQAVNFGIKDRMKVLMVWS 257

Query: 241 LSSFQDKELGAELMQGVYGSCDFWFGLQDKFPLAKAFVDSFVAQNNYHPRWGAHIGYMQT 300
               Q +ELG+++++GVY    +W   Q   PL K  V +       +P +     Y+ T
Sbjct: 258 AGLDQFQELGSDVLEGVYLGAQYWH--QVDTPLNKLLVAATRKAYGINPNYPLAADYIGT 315

Query: 301 YLWAMSVERANTFNPVDVIKVMENSKAQPYVTTIGNVYFRAEDHQMVRPIPILRGKKPSE 360
            +   ++ +A + +   V   ++  + Q      G    R  DHQ+++   +LRGK   +
Sbjct: 316 KVMLEAIVKAGSLDGAAVSAALQGMRFQ---GPTGEELIRPGDHQVLKDYYLLRGKPQGQ 372

Query: 361 MKHKEDFYDII 371
           M+ ++D  ++I
Sbjct: 373 MRDEDDLAEVI 383