Pairwise Alignments

Query, 394 a.a., ABC transporter substrate-binding protein from Rhodopseudomonas palustris CGA009

Subject, 397 a.a., Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  120 bits (302), Expect = 5e-32
 Identities = 105/389 (26%), Positives = 164/389 (42%), Gaps = 23/389 (5%)

Query: 3   VGLTIPLTGVFSG-DGGDLKLGYELAIAQINAGSDIAQKWGLKGKGVLGRQIRHKVSDTE 61
           +G T  ++ ++S  DG +  +  ++AI                G  VLG+ I    +D +
Sbjct: 29  IGFTTDMSSLYSDVDGKNGAMAIQMAIDDF-------------GGKVLGKPIELLSADHQ 75

Query: 62  GKPNLDVQSATQFIQRDKAIMVSGSVSSSSAIALEELGSREKVLYMVGIAGSNDITGKNC 121
            K ++    A ++I      ++ G  +S +A+A  ++   +K LY+V  AGS+ +T   C
Sbjct: 76  NKADIAASKAREWIDTQNLDVMIGGTNSGTALATAKVAEEKKKLYIVNGAGSSALTNAAC 135

Query: 122 QRYGFRSQQNAYMAAKGLAPVVAKALGKNIKMAFLVPDYTYGHSVYDSFSKFATEQGWKQ 181
             Y      +    AKG    V K  GK+    FL  DY +GH++    +      G   
Sbjct: 136 SPYTVHYAYDTVALAKGTGGAVVKQGGKD--WFFLTADYAFGHALETDTANVVKGAGGTV 193

Query: 182 VAKEVVPLGTTDYSSALLNIANSGADVFVNIAFGADSVASTKQAEQFGVLKRMKLVVPNL 241
                 PL T+D+SS LL   +SGA +      G D++AS K A +FG+ K MKL    +
Sbjct: 194 KGAVRAPLNTSDFSSFLLQAQSSGAKILGLANAGGDTIASIKAASEFGITKTMKLAGLLM 253

Query: 242 SSFQDKELGAELMQGVYGSCDFWFGLQDKFPLAKAFVDSFVAQNNYHPRWGAHIGYMQTY 301
                  LG +  QG+Y   D W+   DK   ++AF   F  +    P       Y  T 
Sbjct: 254 FVTDIHSLGLKDTQGMY-LTDSWY--WDKDDASRAFAKKFFEKAKRMPTSIQAANYSATT 310

Query: 302 LWAMSVERANTFNPVDVIKVMENSKAQPYVTTIGNVYFRAEDHQMVRPIPILRGKKPSEM 361
            +  +V  A T    D  KVM   K+       G    R  D + V  + +L  KKP++ 
Sbjct: 311 TYLKAVTAAKT---TDSDKVMAQLKSMKIDDFFGKGTIR-PDGRYVHDMYLLEVKKPADS 366

Query: 362 KHKEDFYDIIDLVDGEAVMNPPDLFGCKL 390
           K   D+  +   + GE V        C L
Sbjct: 367 KSPWDYMKVAATLKGEDVFTTKAESKCAL 395