Pairwise Alignments

Query, 335 a.a., ABC transporter substrate-binding protein from Rhodopseudomonas palustris CGA009

Subject, 358 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  158 bits (399), Expect = 2e-43
 Identities = 98/310 (31%), Positives = 148/310 (47%), Gaps = 9/310 (2%)

Query: 9   ALCALSAFASLQPAKAAD--VICYNCPPQWADWATMLKQVKADLGYDIPFDNKNSGQALS 66
           A+ A +   +L+ A  A+  V     P  WA+W    + +    G      + +S Q ++
Sbjct: 20  AMAADTDLKTLEAAAKAEGAVNSVGMPDDWANWKGTWEDLAKTYGLKHIDTDMSSAQEIA 79

Query: 67  QLIAEKSNPVADIGYFGVNFGMKAKAQGVTQPYKPAKWDEVPAGLKDPDGEWTAIHSGTL 126
           +  AEK N  ADIG  G  FG  A  Q VTQPYKP+ W +VP   KD DG W   ++GT+
Sbjct: 80  KFKAEKDNASADIGDVGAAFGPIAVKQEVTQPYKPSTWAQVPDWAKDKDGHWALAYTGTI 139

Query: 127 GLFVNVDALGGKPVPACWRDLEKPDYKGMVGYLDPPSAAVGYVGAVAVNLALGGSDQDFS 186
              VN   L G  VP  W DL+   YK  VG  D  +AA      +A  +A  G +++ +
Sbjct: 140 AFIVNKKLLHGSEVPTSWADLQTGKYKVSVG--DVSTAAQASNAVLAAAIANKGDEKNIA 197

Query: 187 PAVLFFKKLHDNDAIVPKQTSYARVVSGEIPILFDYDFN--AYRAKYTEKGNFAFVIPCE 244
           P + FF K+     +     + A +  GE+ +   +DFN  +Y+AK     ++  +IP +
Sbjct: 198 PGLQFFTKIAQQGRLGLSNPTIATMEKGEVEVGIVWDFNGLSYKAKMANPDDYVVLIPSD 257

Query: 245 GSVVFPYVVSLTKGAPNADKAKKVMDYLLSDKGQAIWTNAYLRPAR---PIALPPEVKAK 301
           GSV   Y   + K A + + AK   +Y+ SD GQ        RP R    + LP ++   
Sbjct: 258 GSVKSGYTTIINKYAKHPNAAKLTREYIFSDAGQLNLAKGNARPIRAETDLKLPADIAKN 317

Query: 302 FLPDSDYARA 311
            +P   Y +A
Sbjct: 318 LIPGEQYTKA 327