Pairwise Alignments

Query, 335 a.a., ABC transporter substrate-binding protein from Rhodopseudomonas palustris CGA009

Subject, 354 a.a., ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

 Score =  171 bits (433), Expect = 3e-47
 Identities = 109/334 (32%), Positives = 165/334 (49%), Gaps = 10/334 (2%)

Query: 8   TALCALSAFASLQPA--KAADVICYNCPPQWADWATMLKQVKADLGYDIPFDNKNSGQAL 65
           TA+ A +   +L+ A  K   V     P  WA+W    + + +  G      + +S Q L
Sbjct: 19  TAMAASTDLKALEDAARKEGTVNSVGMPDAWANWKGTWEDLASKYGLKHSDTDMSSAQEL 78

Query: 66  SQLIAEKSNPVADIGYFGVNFGMKAKAQGVTQPYKPAKWDEVPAGLKDPDGEWTAIHSGT 125
           ++  AEK N  ADIG  G  FG  A  +GV+QPYKP+ WD+VP   KD DG W   ++GT
Sbjct: 79  AKFEAEKDNASADIGDVGAAFGPIAVTKGVSQPYKPSTWDQVPEWAKDKDGHWALAYTGT 138

Query: 126 LGLFVNVDALGGKPVPACWRDLEKPDYKGMVGYLDPPSAAVGYVGAVAVNLALGGSDQDF 185
           +   +N D +  +  P  W DLEK  YK  +G  D  +AA    G +A  +A  G + + 
Sbjct: 139 IAFIINKDLVKEEERPKTWHDLEKGKYKVAIG--DVGTAAQAANGVLAAAIAYKGDESNV 196

Query: 186 SPAVLFFKKLHDNDAIVPKQTSYARVVSGEIPILFDYDFN--AYRAKYTEKGNFAFVIPC 243
           +P +  F KL     +     +   +  GE+ +   +DFN  +YR +   K  F  +IP 
Sbjct: 197 APGLQLFTKLAQQKRLSLANPTIQTLEKGEVEVGVVWDFNGLSYREQIDPK-RFEVLIPS 255

Query: 244 EGSVVFPYVVSLTKGAPNADKAKKVMDYLLSDKGQAIWTNAYLRPARP--IALPPEVKAK 301
           +GSV+  Y   + K A + + AK   +Y+ SD GQ      + RP R   + LP +V+AK
Sbjct: 256 DGSVISGYTTVINKYAKHPNAAKLTREYIFSDAGQINLAKGHARPIRAEHLKLPADVQAK 315

Query: 302 FLPDSDYARAKNVDWAK-MEAAQKAFTDRYLAEV 334
            LP+  YA A+ +  A+  EA  K     +  +V
Sbjct: 316 LLPNDQYAAAQPIKNAEAWEATSKKLPQMWQEQV 349