Pairwise Alignments

Query, 349 a.a., ATP-binding cassette domain-containing protein from Rhodopseudomonas palustris CGA009

Subject, 334 a.a., Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  291 bits (745), Expect = 2e-83
 Identities = 155/321 (48%), Positives = 209/321 (65%), Gaps = 13/321 (4%)

Query: 12  VIAVRDLRILFPTRDGHD-------TVKAVDGMDFEVRTGETFGIIGESGSGKTTLGRAL 64
           ++ + DL++ F  ++G         T+KAVDG+   +  GET G++GESG GK+T  RA+
Sbjct: 11  LLEIADLKVHFDIKEGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAI 70

Query: 65  VSLLKPTEGQILHQGVDPAALGARAFRKHRRDFQIVFQDPNAALNPRMTIIDSVMEPLEI 124
           + L+K T+G++   G D   + A  +R+ R D Q++FQDP A+LNPRMTI + + EPL  
Sbjct: 71  IGLVKATDGKVAWLGKDLLGMKADEWREVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRT 130

Query: 125 VGEGDAVSR---RRRGIAALERVGLSPEAADRYPHQLSGGQKQRVNIARVLTLRPKVIVC 181
                 +SR   R R  A + +VGL P   +RYPH+ SGGQ QR+ IAR L L PK+I+C
Sbjct: 131 YHP--KLSRQDVRDRVKAMMLKVGLLPNLINRYPHEFSGGQCQRIGIARALILEPKLIIC 188

Query: 182 DEVVAALDVSIRGDVLNLFADLQREFGLTYVFITHDISVVSHISDRIAVTYLGKLMELGP 241
           DE V+ALDVSI+  V+NL   LQRE GL+ +FI HD++VV HISDR+ V YLG  +ELG 
Sbjct: 189 DEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHAVELGT 248

Query: 242 AEDVIEHPLHPYTRALLSAEPIPLPSHLRVDRRIILEGEIPSPVAPPSGCRFRTRCPSVR 301
            ++V  +PLHPYT+AL+SA PIP P   R  +  +LEGE+PSP+ PPSGC FRTRCP   
Sbjct: 249 YDEVYHNPLHPYTKALMSAVPIPDPDLERNKKIQLLEGELPSPINPPSGCVFRTRCPIAG 308

Query: 302 PRCADEVPAWREVRPGHRVAC 322
           P CA   P   E    H V+C
Sbjct: 309 PECAQTRPV-LEGSFRHAVSC 328