Pairwise Alignments

Query, 349 a.a., ATP-binding cassette domain-containing protein from Rhodopseudomonas palustris CGA009

Subject, 334 a.a., oligopeptide ABC transporter ATPase from Escherichia coli BL21

 Score =  287 bits (735), Expect = 2e-82
 Identities = 154/321 (47%), Positives = 205/321 (63%), Gaps = 13/321 (4%)

Query: 12  VIAVRDLRILFPTRDGHD-------TVKAVDGMDFEVRTGETFGIIGESGSGKTTLGRAL 64
           ++ + DL++ F  +DG         T+KAVDG+   +  GET G++GESG GK+T  RA+
Sbjct: 11  LLEIADLKVHFEIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAI 70

Query: 65  VSLLKPTEGQILHQGVDPAALGARAFRKHRRDFQIVFQDPNAALNPRMTIIDSVMEPLEI 124
           + L+K T+G +   G +   +    +R  R D Q++FQDP A+LNPRMTI + + EPL  
Sbjct: 71  IGLVKATDGHVAWLGKELLGMKPDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRT 130

Query: 125 VGEGDAVSR---RRRGIAALERVGLSPEAADRYPHQLSGGQKQRVNIARVLTLRPKVIVC 181
                 +SR   R R  A + +VGL P   +RYPH+ SGGQ QR+ IAR L L PK+I+C
Sbjct: 131 YHP--KMSRQEVRERVKAMMLKVGLLPNLINRYPHEFSGGQCQRIGIARALILEPKLIIC 188

Query: 182 DEVVAALDVSIRGDVLNLFADLQREFGLTYVFITHDISVVSHISDRIAVTYLGKLMELGP 241
           DE V+ALDVSI+  V+NL   LQRE GL+ +FI HD++VV HISDR+ V YLG  +ELG 
Sbjct: 189 DEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHAVELGT 248

Query: 242 AEDVIEHPLHPYTRALLSAEPIPLPSHLRVDRRIILEGEIPSPVAPPSGCRFRTRCPSVR 301
            ++V  +PLHPYTRAL+SA PIP P   +     +LEGE+PSP+ PPSGC FRTRCP   
Sbjct: 249 YDEVYHNPLHPYTRALMSAVPIPDPDLEKNKTIQLLEGELPSPINPPSGCVFRTRCPIAG 308

Query: 302 PRCADEVPAWREVRPGHRVAC 322
           P CA   P   E    H V+C
Sbjct: 309 PECAKTRPV-LEGSFRHAVSC 328