Pairwise Alignments

Query, 1182 a.a., urea carboxylase from Rhodopseudomonas palustris CGA009

Subject, 1175 a.a., Urea carboxylase (EC 6.3.4.6) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 1355 bits (3508), Expect = 0.0
 Identities = 702/1185 (59%), Positives = 849/1185 (71%), Gaps = 22/1185 (1%)

Query: 1    MFSKVLIANRGEIAGRIGRTLRRMGIASVAIYSDADRFTRPMREADEAVRVGGDAASDSY 60
            MFSKVLIANRG IA RI RTL+ +G+ SVA+YS+AD   R +READEA  +G   A++SY
Sbjct: 1    MFSKVLIANRGAIACRIIRTLKTLGVRSVAVYSEADAQARHVREADEAHLLGPAPAAESY 60

Query: 61   LNVDAVIDACLLTGAQAVHPGYGFLSENRGFAERLKQHGIAFIGPRPEHLEAFGLKHRAR 120
            L  D ++      GAQA+HPGYGFLSEN  FAE  +  GIAFIGP P+ + AFGLKH AR
Sbjct: 61   LRADRILQIAKDCGAQAIHPGYGFLSENPAFAEACEAAGIAFIGPAPQQMRAFGLKHTAR 120

Query: 121  ELAQGSNVPLLPGTGLIDSIDEALEAAARIGFPLMLKSTAGGGGIGMQLCHDEATLRERF 180
            +LAQ   VPLLPG+GL+  + +A   AARIG+P+MLKSTAGGGGIGM+L  ++  LR+ F
Sbjct: 121  DLAQARGVPLLPGSGLLLDLAQATAEAARIGYPVMLKSTAGGGGIGMRLVWNDTELRDAF 180

Query: 181  ATVQRTARASFGDARVYLERFVADARHIEVQIFGDGQGNVIALGERDCSLQRRNQKVVEE 240
             +V R A+A+F DA ++LE++V  ARHIEVQ+FGDG G VIALGERDCS+QRRNQKV+EE
Sbjct: 181  ESVGRLAQANFKDAGLFLEKYVEQARHIEVQVFGDGAGGVIALGERDCSVQRRNQKVIEE 240

Query: 241  TPAPGISDEMRARLHQAAVALGQSVAYESAGTVEFIYDVARDEFYFLEVNTRLQVEHPVT 300
            TPAPG+SD  R  LH  AV L Q+V Y SAGTVEF+YD A   FYFLEVNTRLQVEH VT
Sbjct: 241  TPAPGLSDAQRTELHATAVRLAQAVNYRSAGTVEFVYDAASGAFYFLEVNTRLQVEHGVT 300

Query: 301  EAVFGVDLVEWMVRQAAGD-SPLATYTPRPPKGAAIEVRLYAENPGAGFRPSAGRLTRVD 359
            E V GVDLV WM++ AAGD  PLAT  P  P+GA+I+VRLYAE+P   F+PSAG LT V 
Sbjct: 301  EQVCGVDLVAWMLQLAAGDLPPLATLQP-VPRGASIQVRLYAEDPAKNFQPSAGLLTDVV 359

Query: 360  FPDDVRVDGWIETGDEVTPFYDPMLAKLIVHAADRDAAIDQIIGALAATTVAGIETNLDY 419
            FP   RVD W+E G EV  +YDPMLAKLIV A  R+ A+ Q+  AL AT +AGIETNL Y
Sbjct: 360  FPPRARVDSWVERGTEVPAWYDPMLAKLIVTADTREQALLQLEDALDATRLAGIETNLGY 419

Query: 420  LRAIASSALFHSGKVATKVLADFSFAARTIDVVAPGAQSGLQELPGRLHLWHVGVPPSGP 479
            LR +    +F  G+  T+ LA F F  RTIDV+ PG Q+ +Q+ PGR   W VGVPPSGP
Sbjct: 420  LRQVVRDPVFREGRQVTRFLATFDFKPRTIDVLEPGVQTSVQDSPGRQGYWAVGVPPSGP 479

Query: 480  MDERSFRLANRIVGNPETTAAFELTVSGPTLRFNADAVVALCGAGMAAKLDGTAVSNDAP 539
            MD  + R+AN++VGN    AA E+T++GPTLRFN   VVA+ GA     L+G  V+    
Sbjct: 480  MDTHAHRMANQLVGNASDAAALEITLAGPTLRFNVATVVAVTGAPAKLTLNGQPVAMWQA 539

Query: 540  IAVRAGQILAIGKIEGAGQRCYLAIRGGFDAPEVFGSRAVFTLGAFGGHATGALKAGDVL 599
            +AV AG  LA+G+ E  G R  LA+ GG D P   GSR+ FTLG FGGHA   L+ GDVL
Sbjct: 540  LAVPAGATLAVGRCE-TGVRLALAVAGGLDVPLYLGSRSTFTLGQFGGHAGRHLRTGDVL 598

Query: 600  HFGSIAPAAEPRALSD-AERPALTRAWQIGVIYGPHGAPDFFRDEDIATLFASDYEVHFN 658
            H      + E + +SD    P  T  W I V+YGPHGAPDFF  EDIA  F +D++VH N
Sbjct: 599  HLADAPASVEAQTMSDYVYAPEYTNHWDIDVLYGPHGAPDFFTPEDIAMFFGTDWKVHHN 658

Query: 659  SARTGVRLIGPKPQWARADGGEAGLHPSNIHDNAYAVGAIDFTGDMPIILGPDGPSLGGF 718
            S+RTGVRLIGPKPQWAR+DGGEAGLHPSNIHDNAYA+GAIDFTGDMP+ILGPDGPSLGGF
Sbjct: 659  SSRTGVRLIGPKPQWARSDGGEAGLHPSNIHDNAYAIGAIDFTGDMPVILGPDGPSLGGF 718

Query: 719  VCPAVVARDELWKVGQLKPGDKVRFVPVMRADDPVAGPTAIAAPAKLGSAIVGRHDDGEI 778
            VCPAVV  DELWK+GQL+PGD V F    RA  P       A+P      +  R  +GE 
Sbjct: 719  VCPAVVLHDELWKLGQLRPGDTVHF--HRRAGSP-------ASP-----ILDDRAAEGER 764

Query: 779  P-VVYRRAGDDNLLVEYGPMELDIALRLRVHVLAEAVEKAKLAGLIDLTPGIRSLQIHYD 837
            P  V R+AGD  +L+E+GP+ LD+ LR+RV  L E +++  L G+IDLTPGIRSLQ+H+D
Sbjct: 765  PRRVVRQAGDRYVLIEFGPLTLDLELRMRVQALLEGLKRKHLGGVIDLTPGIRSLQVHFD 824

Query: 838  SAVMSRRKLLDALVRIERELPSVEAMAVPSRIIHLPLSWNDPQAVLAMRKYQELVRPDAP 897
               + R +LL  +  ++  LP V+ M VPSR + LPLSW+DPQ  LA+ KY + VRPDAP
Sbjct: 825  PTRLPREQLLRVIAEVDDALPPVDEMVVPSRTVVLPLSWDDPQTKLAIEKYMQSVRPDAP 884

Query: 898  WCPSNIEFIRRINGLDNDDDVKRIVFDANYLVLGLGDVYLGAPVATPVDPRHRLVTTKYN 957
            WCPSNIEFIRRINGLD+ +DV ++VFDA YLVLGLGDVYLGAPVATP+DPRHRLVTTKYN
Sbjct: 885  WCPSNIEFIRRINGLDSIEDVFQVVFDARYLVLGLGDVYLGAPVATPLDPRHRLVTTKYN 944

Query: 958  PARTWTPENAVGIGGAYMCIYGMEGPGGYQLFGRTIQVWNTWRTTEVFKP-GHPWLLRFF 1016
            PARTWTPENAVGIGGAY+C+YGMEGPGGYQ  GRT+Q+WN WR      P   PWLLRFF
Sbjct: 945  PARTWTPENAVGIGGAYLCVYGMEGPGGYQFVGRTLQMWNRWRHGTPGTPFEQPWLLRFF 1004

Query: 1017 DQIRFFPVTPEELLDARAAFPHGGYPLKIEETTFSYADYKAFLAREAQGITAFKTRQQTA 1076
            DQIRF PV+ + L D RA FPHGGY L+ E+ TFS  DY+ FLA   + I+AFKTRQQ A
Sbjct: 1005 DQIRFEPVSEDALKDIRARFPHGGYALRTEDGTFSLKDYRRFLAENGEAISAFKTRQQAA 1064

Query: 1077 FEAERQRWRDA-KLDEVGEDD-TAAALGSGGDVPDGCVGQFTEAPGNVWKLTVEPGEHVE 1134
            FEAER+RW  A ++D   E D +AA + +  D+P+G     T  PGNVWK+ V  G+ V+
Sbjct: 1065 FEAERERWAAAGQVDYASEADVSAAGVEAEIDLPEGGRALATSVPGNVWKVAVSVGQQVQ 1124

Query: 1135 IGQTLAVIESMKMEIAIPATARGIVRALNAKPGQTLRAGDLICAL 1179
             G  L VIESMKME  + A A   V +L    G ++ AG  +  L
Sbjct: 1125 AGDVLLVIESMKMEFNLLAPANATVHSLMCAQGGSVAAGQNVLVL 1169