Pairwise Alignments

Query, 597 a.a., nickel-dependent hydrogenase large subunit from Rhodopseudomonas palustris CGA009

Subject, 597 a.a., Uptake hydrogenase large subunit (EC 1.12.99.6) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  801 bits (2068), Expect = 0.0
 Identities = 372/597 (62%), Positives = 471/597 (78%), Gaps = 2/597 (0%)

Query: 1   MTNVTTPNGFKLDNAGRRVVVDPVTRIEGHLRVEVNVDSNNVIRNAVSTGTMWRGIEVIL 60
           M+N     G+ +++AGRR++VDP+TRIEGH+R EVN+D  NVI NAVS GTM+RG+E+IL
Sbjct: 1   MSNQYQTQGYTVNDAGRRLIVDPITRIEGHMRCEVNIDEQNVITNAVSCGTMFRGLEIIL 60

Query: 61  KGRDPRDAWAFTQRICGVCTGTHALTSVRAVENALKINVPENANTIRNIMQLALYVHDHL 120
           +GRDPRDAWAF +RICGVCTG HAL SV A+E+A+ I VP+NAN IRNIM   L+ HDHL
Sbjct: 61  QGRDPRDAWAFVERICGVCTGVHALASVYAIEDAIGIQVPDNANIIRNIMLATLWCHDHL 120

Query: 121 VHFYHLHALDWVDVVSALKADPKATSALAQSISPWPMSSPGYFKDLQIRLTKFVESGQLG 180
           VHFY L  +DW+DV++ALKADP+ATS LAQS+S WPMSSPGYF D+Q RL KFV+ GQLG
Sbjct: 121 VHFYQLAGMDWIDVLNALKADPRATSQLAQSLSAWPMSSPGYFFDVQNRLKKFVDGGQLG 180

Query: 181 PFKNGYWGHPAYKLPPEANLMAVAHYLEALDFQKEIVKIHTIYGGKNPHPNWLVGGVPCS 240
            F+NGYWGHP YKL PEANLM  AHYLEALDFQ+EIVKIHTI+GGKNPHPNW+VGG+PC+
Sbjct: 181 IFRNGYWGHPQYKLSPEANLMGFAHYLEALDFQREIVKIHTIFGGKNPHPNWIVGGMPCA 240

Query: 241 INVDGTGAVGAINIERLNLVSSIIDQTVAFVEQVYVPDLVAIAGFYKDW-LYGGGLSSKS 299
           IN+D +GAVGAIN+ERLNLV SII +T  F+  V VPD +AI  F K W   G GLS K 
Sbjct: 241 INLDQSGAVGAINMERLNLVQSIITRTADFINNVMVPDALAIGQFNKAWSQIGTGLSDKC 300

Query: 300 VMSYGDLPEYANDYSDKSLMLPRGVIINGNLNEVLPVDLSAPDQIQEFVTHSWYKYADEG 359
           V+SYG  P+ AND+S +SL++P G +ING+   V+PVDL+ P QIQEFV H+WY+Y D+ 
Sbjct: 301 VLSYGAFPDIANDFSQQSLLMPGGAVINGDFKNVMPVDLADPQQIQEFVDHAWYRYPDDR 360

Query: 360 KGLHPYDGVTEPNFVLGPNAKGTRTNIEALDESAKYSFLKAPRWKGHAVEVGPLARYIIG 419
            G HP+DG+T+P +  G + KG+ T+I+ L+E  +YS++KAPRW+GHA+EVGPLAR +I 
Sbjct: 361 LGRHPFDGITDPWYNPG-DVKGSDTHIQQLNEQERYSWIKAPRWRGHAMEVGPLARTLIA 419

Query: 420 YAQGKPEFKEPTEKLLKTLDVPVTALFSTLGRTAARGLECQWAARKLRAAQDKLMASIKA 479
           Y +G     E  ++++  L +P++ + STLGR   R  E QWA  KL+   D+LM ++K 
Sbjct: 420 YHKGDAATIESVDRMMSALKLPLSGIQSTLGRILCRAHEAQWAVGKLQYFFDRLMTNLKN 479

Query: 480 GDLSTANTDKWHPSSWPKDVKGVGFTEAPRGALAHWVKIKDTRIDNYQCVVPTTWNGSPR 539
           GDL+TANT+KW P+SWP+  +G+GFTEAPRGAL HW  I+D +I+ YQCVVPTTWN SPR
Sbjct: 480 GDLATANTEKWEPASWPQHCRGIGFTEAPRGALGHWASIRDQKIELYQCVVPTTWNASPR 539

Query: 540 DPQGNIGAFEAALLDTPMADPNQPLEIIRTLHSFDPCLACSTHVMSEDGQEMAQVKV 596
           DP+  IGA+EAAL+ T MA P+QPLEI+RTLHSFDPCLACSTHV+ +DG E+  V+V
Sbjct: 540 DPKKQIGAYEAALMGTQMAIPDQPLEILRTLHSFDPCLACSTHVLGDDGSELIAVQV 596