Pairwise Alignments

Query, 370 a.a., hydrogenase small subunit from Rhodopseudomonas palustris CGA009

Subject, 360 a.a., Uptake hydrogenase small subunit precursor (EC 1.12.99.6) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  612 bits (1579), Expect = e-180
 Identities = 280/356 (78%), Positives = 318/356 (89%), Gaps = 2/356 (0%)

Query: 6   ETFYEVIRRQGITRRSFVKFCSLTATSLGLGPIGATQIAHALETKPRVPVIWMHGLECTC 65
           ETFYEV+RR+GI+RRSF+K+CSLTATSLGL P    QIAHA+E KPR PV+W+HGLECTC
Sbjct: 2   ETFYEVMRRKGISRRSFLKYCSLTATSLGLAPSFVPQIAHAMENKPRTPVLWLHGLECTC 61

Query: 66  CSESFIRSAHPLVKDAVLSMISLDYDDTIMAAAGHQADAILEETRKKYKGQYVLAVEGNP 125
           C+ESFIRSAHPL KD VLSMISLDYDDT+MAAAGHQA+AILEE   KYKGQY+LAVEGNP
Sbjct: 62  CTESFIRSAHPLAKDVVLSMISLDYDDTLMAAAGHQAEAILEEIMTKYKGQYILAVEGNP 121

Query: 126 PLNEDGMFCIDGGRPFVEKLKEMAEDSMAVIAWGSCASWGCVQAAKPNPTNATPIDKVIR 185
           PLNEDGMFCI  G+PFVEKLK +A+D+ A+IAWGSCASWGCVQAAKPNPT ATPI KVI 
Sbjct: 122 PLNEDGMFCIQSGKPFVEKLKHVAKDAKAIIAWGSCASWGCVQAAKPNPTQATPIHKVIT 181

Query: 186 NKPVIKVPGCPPIAEVMTGVVSYIITFGRLPELDRQGRPKMFYSQRIHDKCYRRPHFDAG 245
           +KP+IKVPGCPPI EVMTGV++Y++TF R+PELDRQGRPKMFYSQRIHDKCYRRPHFDAG
Sbjct: 182 DKPIIKVPGCPPIPEVMTGVITYMLTFDRVPELDRQGRPKMFYSQRIHDKCYRRPHFDAG 241

Query: 246 QFVEEWDDDGARKGYCLYKMGCKGPTTYNACSTVRWNGGVSFPIQSGHGCIGCSEDAFWD 305
           QFVE WDD+ ARKGYCLYK+GCKGPTTYNACSTV+WN G SFPI++GHGCIGCSED FWD
Sbjct: 242 QFVEAWDDESARKGYCLYKVGCKGPTTYNACSTVQWNEGTSFPIKAGHGCIGCSEDGFWD 301

Query: 306 KGSFYDRLTTINQFGIEANADKIGATVAGVVGTAIAAHAAVTTVRNL--SRRKEVP 359
           KGSFYDRLT I+ FGIEANAD+IGAT AGVVG A+AAHAA++  +    +R+ + P
Sbjct: 302 KGSFYDRLTDIHAFGIEANADQIGATAAGVVGAAVAAHAAISVAKRARDTRKTDAP 357