Pairwise Alignments

Query, 370 a.a., hydrogenase small subunit from Rhodopseudomonas palustris CGA009

Subject, 372 a.a., Uptake hydrogenase small subunit precursor (EC 1.12.99.6) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  289 bits (739), Expect = 1e-82
 Identities = 146/363 (40%), Positives = 217/363 (59%), Gaps = 12/363 (3%)

Query: 11  VIRRQGITRRSFVKFCSLTATSLGLGPIGATQIAHALETKPRVPVIWMHGLECTCCSESF 70
           +I   GI RR F+K C+  A ++GL    A ++A ++    R PVIW+   ECT C+ES 
Sbjct: 7   LITSHGINRRDFMKLCAALAATMGLSSKAAAEMAESVSNPQRPPVIWIGAQECTGCTESL 66

Query: 71  IRSAHPLVKDAVLSMISLDYDDTIMAAAGHQADAILEETRKKYKGQYVLAVEGNPPLNED 130
           +R+ HP V++ VL  ISL+Y + + AA GHQ +       +KYKGQYVL V+G+ PL ++
Sbjct: 67  LRATHPTVENLVLETISLEYHEVLSAAFGHQVEENKHNALEKYKGQYVLVVDGSIPLKDN 126

Query: 131 GMFCIDGGRPFVEKLKEMAEDSMAVIAWGSCASWGCVQAAKPNPTNATPIDKVIRNKPVI 190
           G++C+  G P V+ +++ A+ + A+IA GSC++WG V AA  NPT A  + +V+  K VI
Sbjct: 127 GIYCMVAGEPIVDHIRKAADGAAAIIAIGSCSAWGGVAAAGVNPTGAVSLQEVLPGKTVI 186

Query: 191 KVPGCPPIAEVMTGVVSYIITFGRLPELDRQGRPKMFYSQRIHDKCYRRPHFDAGQFVEE 250
            +PGCPP        V++IIT+G  P+LD + RP   Y + IH+ C RRPHFDAG+F +E
Sbjct: 187 NIPGCPPNPHNFLATVAHIITYGTPPKLDAKNRPTFAYGRLIHEHCERRPHFDAGRFAKE 246

Query: 251 WDDDGARKGYCLYKMGCKGPTTYNACSTVRW--NGGVSFPIQSGHGCIGCSEDAFWDKGS 308
           + D+G R+G+CLY +GCKGP T+  CST+++   GGV +P+  GH C GC+E+       
Sbjct: 247 FGDEGHRQGWCLYHLGCKGPETWGNCSTLQFCDVGGV-WPVAIGHPCYGCNEEGIGFHKG 305

Query: 309 FYDRLTTINQF----GIEANADKIGATVAGVVG-----TAIAAHAAVTTVRNLSRRKEVP 359
            +      NQ       + N  + G   AG VG       + A  +V  VR L R+++  
Sbjct: 306 IHQLAHVENQTPRSEKPDVNMKEGGNISAGAVGLLGGVVGLVAGVSVMAVRELGRQQKKD 365

Query: 360 NGN 362
           N +
Sbjct: 366 NAD 368