Pairwise Alignments

Query, 370 a.a., hydrogenase small subunit from Rhodopseudomonas palustris CGA009

Subject, 372 a.a., hydrogenase 2, small subunit from Escherichia coli BL21

 Score =  295 bits (756), Expect = 1e-84
 Identities = 148/363 (40%), Positives = 219/363 (60%), Gaps = 12/363 (3%)

Query: 11  VIRRQGITRRSFVKFCSLTATSLGLGPIGATQIAHALETKPRVPVIWMHGLECTCCSESF 70
           +I   GI RR F+K C+  A ++GL    A ++A ++    R PVIW+   ECT C+ES 
Sbjct: 7   LIHSHGINRRDFMKLCAALAATMGLSSKAAAEMAESVTNPQRPPVIWIGAQECTGCTESL 66

Query: 71  IRSAHPLVKDAVLSMISLDYDDTIMAAAGHQADAILEETRKKYKGQYVLAVEGNPPLNED 130
           +R+ HP V++ VL  ISL+Y + + AA GHQ +       +KYKGQYVL V+G+ PL ++
Sbjct: 67  LRATHPTVENLVLETISLEYHEVLSAAFGHQVEENKHNALEKYKGQYVLVVDGSIPLKDN 126

Query: 131 GMFCIDGGRPFVEKLKEMAEDSMAVIAWGSCASWGCVQAAKPNPTNATPIDKVIRNKPVI 190
           G++C+  G P V+ +++ AE + A+IA GSC++WG V AA  NPT A  + +V+  K VI
Sbjct: 127 GIYCMVAGEPIVDHIRKAAEGAAAIIAIGSCSAWGGVAAAGVNPTGAVSLQEVLPGKTVI 186

Query: 191 KVPGCPPIAEVMTGVVSYIITFGRLPELDRQGRPKMFYSQRIHDKCYRRPHFDAGQFVEE 250
            +PGCPP        V++IIT+G+ P+LD + RP   Y + IH+ C RRPHFDAG+F +E
Sbjct: 187 NIPGCPPNPHNFLATVAHIITYGKPPKLDDKNRPTFAYGRLIHEHCERRPHFDAGRFAKE 246

Query: 251 WDDDGARKGYCLYKMGCKGPTTYNACSTVRW--NGGVSFPIQSGHGCIGCSEDAFWDKGS 308
           + D+G R+G+CLY +GCKGP TY  CST+++   GGV +P+  GH C GC+E+       
Sbjct: 247 FGDEGHREGWCLYHLGCKGPETYGNCSTLQFCDVGGV-WPVAIGHPCYGCNEEGIGFHKG 305

Query: 309 FYDRLTTINQF----GIEANADKIGATVAGVVG-----TAIAAHAAVTTVRNLSRRKEVP 359
            +      NQ       + NA + G   AG +G       + A  +V  VR L R+++  
Sbjct: 306 IHQLANVENQTPRSQKPDVNAKEGGNVSAGAIGLLGGVVGLVAGVSVMAVRELGRQQKKD 365

Query: 360 NGN 362
           N +
Sbjct: 366 NAD 368