Pairwise Alignments

Query, 370 a.a., hydrogenase small subunit from Rhodopseudomonas palustris CGA009

Subject, 372 a.a., hydrogenase 1, small subunit from Escherichia coli BL21

 Score =  543 bits (1398), Expect = e-159
 Identities = 240/354 (67%), Positives = 288/354 (81%)

Query: 6   ETFYEVIRRQGITRRSFVKFCSLTATSLGLGPIGATQIAHALETKPRVPVIWMHGLECTC 65
           ETFY+ +RRQG+TRRSF+K+CSL ATSLGLG   A +IA ALE KPR+PV+W+HGLECTC
Sbjct: 5   ETFYQAMRRQGVTRRSFLKYCSLAATSLGLGAGMAPKIAWALENKPRIPVVWIHGLECTC 64

Query: 66  CSESFIRSAHPLVKDAVLSMISLDYDDTIMAAAGHQADAILEETRKKYKGQYVLAVEGNP 125
           C+ESFIRSAHPL KD +LS+ISLDYDDT+MAAAG QA+ + E+   +Y G+Y+LAVEGNP
Sbjct: 65  CTESFIRSAHPLAKDVILSLISLDYDDTLMAAAGTQAEEVFEDIITQYNGKYILAVEGNP 124

Query: 126 PLNEDGMFCIDGGRPFVEKLKEMAEDSMAVIAWGSCASWGCVQAAKPNPTNATPIDKVIR 185
           PL E GMFCI  GRPF+EKLK  A  + A+IAWG+CASWGCVQAA+PNPT ATPIDKVI 
Sbjct: 125 PLGEQGMFCISSGRPFIEKLKRAAAGASAIIAWGTCASWGCVQAARPNPTQATPIDKVIT 184

Query: 186 NKPVIKVPGCPPIAEVMTGVVSYIITFGRLPELDRQGRPKMFYSQRIHDKCYRRPHFDAG 245
           +KP+IKVPGCPPI +VM+ +++Y++TF RLP++DR GRP MFY QRIHDKCYRR HFDAG
Sbjct: 185 DKPIIKVPGCPPIPDVMSAIITYMVTFDRLPDVDRMGRPLMFYGQRIHDKCYRRAHFDAG 244

Query: 246 QFVEEWDDDGARKGYCLYKMGCKGPTTYNACSTVRWNGGVSFPIQSGHGCIGCSEDAFWD 305
           +FV+ WDDD ARKGYCLYKMGCKGPTTYNACS+ RWN GVSFPIQSGHGC+GC+E+ FWD
Sbjct: 245 EFVQSWDDDAARKGYCLYKMGCKGPTTYNACSSTRWNDGVSFPIQSGHGCLGCAENGFWD 304

Query: 306 KGSFYDRLTTINQFGIEANADKIGATVAGVVGTAIAAHAAVTTVRNLSRRKEVP 359
           +GSFY R+  I Q G  + AD +G T  GVV  A+  HA  + V    R  + P
Sbjct: 305 RGSFYSRVVDIPQMGTHSTADTVGLTALGVVAAAVGVHAVASAVDQRRRHNQQP 358