Pairwise Alignments

Query, 333 a.a., HupU protein from Rhodopseudomonas palustris CGA009

Subject, 400 a.a., Uptake hydrogenase small subunit precursor (EC 1.12.99.6) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 78.6 bits (192), Expect = 3e-19
 Identities = 65/269 (24%), Positives = 110/269 (40%), Gaps = 25/269 (9%)

Query: 6   ILWLQGASCGGCTMAALDGGHSGWFAELKRFGIDLLWHPSVSEATAEEAVAIFERIASGE 65
           ++W+ G  C  CT + +   H     ++    I L +  ++  A   +A  +F+ I +  
Sbjct: 82  VVWIHGLECTCCTESFIRSSHP-LAKDVILSLISLDYDDTLMAAAGAQAEEVFDDITTRY 140

Query: 66  QKLGALVLEGAVLRGPNGSGRFNMLGGTGRSMLHWVTALAPRADYVVAAGSCAAFGGVPM 125
                L +EG    G  G   F + GG  R  +  +   A  A  ++A G+CA++G V  
Sbjct: 141 AGKYILAVEGNPPLGEQGM--FCISGG--RPFIEKLKKAAAGASAIIAWGNCASWGCVQA 196

Query: 126 AGGNPTDASGLQYAAAEPGGVLGTAFRSRAGLPVINIAGCAPHPGWISETLAALALGGVD 185
           A  NPT A+ +     +               P++ + GC P P  +S  +  +      
Sbjct: 197 ARPNPTQATPIDKVITDK--------------PIVKVPGCPPIPDVMSAIITYMVTFD-R 241

Query: 186 TAALDAFGRPRFFADHLAHHGCARNEYY---EFKAS-AEELSQQGCLMEHLGCKATQAVG 241
              LD  GRP  F     H  C R  ++   EF  S  ++ +++G  +  +GCK      
Sbjct: 242 LPELDRMGRPLMFYGQRIHDKCYRRAHFDAGEFVESWDDDAARKGYCLYKMGCKGPTTYN 301

Query: 242 DCNQRGWN-GSGSCTSGGYACIACTSPGF 269
            C+   WN G       G+ C+ C+  GF
Sbjct: 302 ACSSTRWNDGVSFPIQSGHGCLGCSENGF 330