Pairwise Alignments

Query, 595 a.a., branched-chain amino acid ABC transporter ATP-binding protein/permease from Rhodopseudomonas palustris CGA009

Subject, 249 a.a., ABC transporter from Pseudomonas simiae WCS417

 Score =  173 bits (438), Expect = 8e-48
 Identities = 99/247 (40%), Positives = 142/247 (57%), Gaps = 6/247 (2%)

Query: 347 LATNHLSKNFNGIAAVSDVTVTFEPNKVHAIIGPNGAGKTTFTNLLSGALPASAGSVQID 406
           L T  L   +    AV+ V +  E   +H IIGPNGAGKT+  + L+G   A+AG++  D
Sbjct: 5   LETKDLELAYGAFHAVNGVNLKVEAGTIHTIIGPNGAGKTSLFHCLTGERQATAGAIHFD 64

Query: 407 ELDVTGWPAYRIARAGLGRSYQRTNIFPRFTVRENCALAAQLDKGA----LWRLRDAPYR 462
             ++   PA+     G+ RS+Q T++F   +VREN  LAAQ   GA     WR  D+   
Sbjct: 65  GKNLMRKPAHGRVGLGMARSFQLTSLFQNLSVRENLRLAAQGRDGARALNFWRRVDSKRE 124

Query: 463 TREQAAVDRALRVAGLADRGDTIAGRMSNGEQRQLEIAMLIASGADLLILDEPLAGMGPE 522
             E A  D+ L    L  R DT+AG +S+G+QR LE+ M I S   LL+LDEP +GMG +
Sbjct: 125 HLEMA--DQVLERLQLTARADTLAGELSHGQQRVLEVGMSICSKPKLLMLDEPTSGMGID 182

Query: 523 ETQRVVALLRDLVRDHTVIVIEHDMDAVFAAADTLTVLVQGKLFARGRPDEIRRNEAVLE 582
           +   +  L+ DL RDHTV++IEH+M  V + +  +TV+  G++   G P+ +R +E V  
Sbjct: 183 DIPIMTQLISDLGRDHTVLLIEHNMSIVMSISQRITVMSHGQILVEGTPEFVRADERVRT 242

Query: 583 AYLGHHA 589
           AYLG  A
Sbjct: 243 AYLGEAA 249