Pairwise Alignments

Query, 595 a.a., branched-chain amino acid ABC transporter ATP-binding protein/permease from Rhodopseudomonas palustris CGA009

Subject, 330 a.a., Benzoate transport, inner-membrane translocator precursor from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  265 bits (677), Expect = 2e-75
 Identities = 138/317 (43%), Positives = 199/317 (62%), Gaps = 7/317 (2%)

Query: 2   LTRPNLVVVLFFTLLLGCLLALPFVAGPYPVKLMTRIVIIATFVLSLDLLIGVTGLVSFG 61
           L R   V++L   + L     +P     + ++++++++I+A F +SLDLL GVTGLVS G
Sbjct: 11  LPRSMQVILLLGAVALAAFPLMPLTGVDFYLQMLSQMMILAIFAMSLDLLQGVTGLVSLG 70

Query: 62  HAAFFGCGAYAVYFVSPEAEAANVIVALGAGLLAGGLAALVVGAFATLTRGFYFIMVTLA 121
           HAA+FG   YA+ F++P     ++  +L    L  GLAAL++G F   TRG YFIMVT+A
Sbjct: 71  HAAYFGLAGYALAFLTPADTPISLWWSLPVSALGAGLAALIIGFFVVRTRGIYFIMVTMA 130

Query: 122 AGQMLFALFHDTDIAKGSDGAYINVKPELTLAGLTLLDFSDRRQFYYVCVVVLIAAYGLL 181
             QM+F LF D     GSDG Y+N +P+ +L G T +D  ++  FYY  +++L+  Y  L
Sbjct: 131 FAQMVFFLFFDNKALGGSDGIYVNFRPDASLFGWTGIDLENKTTFYYFTLLLLVLVYAFL 190

Query: 182 LALVRSPFGRVLQGIRANEVRMSSLGYDTYRYKLAAFTIAGMVAGLAGALFASIDGFVTP 241
             L+ SPFGRVL GIR NE RM ++GY T+ YKLAAFT+AG +AG+AG L+A+  GFV P
Sbjct: 191 RRLLFSPFGRVLAGIRVNEHRMRAVGYGTFGYKLAAFTLAGALAGVAGFLWAAQTGFVNP 250

Query: 242 DLLNWHQSGLAIMMVVLGGAGTLFGPILGALAYSSLEELLKTASIVGSFVADHWRLGTGA 301
           +L+ +H S  AIMMV+LGG G   G I+GA A+  +    K        +  HW+L  G+
Sbjct: 251 ELMGFHMSAHAIMMVILGGMGNFAGAIVGAFAFEYVMHFFKD-------LTKHWQLLMGS 303

Query: 302 TLIAAVLMSPDGLAGLL 318
            ++  V+ +P GL GL+
Sbjct: 304 FIVLIVVFAPRGLLGLV 320