Pairwise Alignments

Query, 595 a.a., branched-chain amino acid ABC transporter ATP-binding protein/permease from Rhodopseudomonas palustris CGA009

Subject, 589 a.a., ABC-type branched-chain amino acid transport systems, ATPase component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  252 bits (643), Expect = 3e-71
 Identities = 188/587 (32%), Positives = 294/587 (50%), Gaps = 25/587 (4%)

Query: 16  LLGCLLALPFVAG-PYPVKLMTRIVIIATF---VLSLDLLIGVTGLVSFGHAAFFGCGAY 71
           LL   LA+P VA  P P   +T++  I  +   VL L LL GV GL SFG AAF G GAY
Sbjct: 9   LLILALAIPLVAVLPLPDFWITQLNYIGMYSMTVLGLILLTGVGGLTSFGQAAFVGIGAY 68

Query: 72  AVYFVSPEAEAAN-VIVALGAGLLAGGLAALVVGAFATLTRGFYFIMVTLAAGQMLFALF 130
              +++     +  + + +G  L AG  +AL+VG       G Y  + T+A G  L+ L 
Sbjct: 69  TTAWLTLNLGMSPWITLFIGMALTAG--SALIVGLITLRMSGHYLPLATIAWGLSLYYLM 126

Query: 131 HDTDIAKGSDGAYINVKPELTLAGLTLLDFSDRRQFYYVCVVVLIAAYGLLLALVRSPFG 190
            + D     DG  + +K  L++ G    D    R F+ +   +L+A    L+ L+ S  G
Sbjct: 127 GNLDALGKYDGL-LGIK-SLSVGGF---DIGQGRAFFVLTWFILLAFVAALMFLLDSRAG 181

Query: 191 RVLQGIRANEVRMSSLGYDTYRYKLAAFTIAGMVAGLAGALFASIDGFVTPDLLNWHQSG 250
           R ++ +++      ++G  T+RYK+  F +A + A +AG L A     V P         
Sbjct: 182 RAIRSLKSGSQMAEAMGISTFRYKVTIFVLAALSASVAGWLLAHFQRTVNPSAFGLKMGI 241

Query: 251 LAIMMVVLGGAGTLFGPILGALAYSSLEELLKTA--SIVGSFVADHWRLGTGATLIAAVL 308
             + M V+GG G ++G I+GA     LE+ L+     ++G+    +  +  G  L+  + 
Sbjct: 242 EYLFMAVIGGVGHVWGAIVGAGLIRVLEDQLQVLLPRLIGTS-GSYEVIVFGIALVVVLK 300

Query: 309 MSPDGLAGLLN-WRRKQPQATPARPPADEPQR--PAKTAKALATNHLSKNFNGIAAVSDV 365
             PDGL  ++   +  +P+    +  A  P+R  PA     L        F G+ AV+D+
Sbjct: 301 YLPDGLWSVVGKGKAPKPRTVDWQNAAALPERAKPATGELVLDVQKARMQFGGLVAVNDI 360

Query: 366 TVTFEPNKVHAIIGPNGAGKTTFTNLLSGALPASAGSVQIDELDVTGWPAYRIARAGLGR 425
           +      ++  +IGPNGAGK+T  NL++G LPA+ G V+    +V G P+  IA+ G+ R
Sbjct: 361 SFQIHAGQIVGLIGPNGAGKSTTFNLITGVLPATGGEVRFQGGNVIGKPSRAIAQLGIAR 420

Query: 426 SYQRTNIFPRFTVRENCALAAQL--DKG---ALWRLRDAPYRTREQAAVDRALRVAGLAD 480
           ++Q   + P  TV EN AL A     KG   A+ R   A  R   + A  R L   G+ +
Sbjct: 421 TFQHVKMIPDMTVLENVALGAHTRGRKGVLPAMLRANRAEERLLFREA-QRQLERIGMGE 479

Query: 481 RGDTIAGRMSNGEQRQLEIAMLIASGADLLILDEPLAGMGPEETQRVVALLRDL-VRDHT 539
                AG ++ G QR +EIA  + +   LL+LDEP AG+  +E Q +  +LR L     +
Sbjct: 480 YLHEQAGNLAMGPQRLMEIARALCADPTLLLLDEPAAGLRHKEKQALAGVLRQLKAEGMS 539

Query: 540 VIVIEHDMDAVFAAADTLTVLVQGKLFARGRPDEIRRNEAVLEAYLG 586
           ++++EHDMD V    D L V+  G L  +G P+ ++++  V  AYLG
Sbjct: 540 ILLVEHDMDLVMQICDHLVVMEFGTLLTQGDPEHVQQDPKVRAAYLG 586