Pairwise Alignments

Query, 595 a.a., branched-chain amino acid ABC transporter ATP-binding protein/permease from Rhodopseudomonas palustris CGA009

Subject, 844 a.a., ABC transporter ATP-binding/permease protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  295 bits (755), Expect = 5e-84
 Identities = 197/588 (33%), Positives = 294/588 (50%), Gaps = 39/588 (6%)

Query: 20  LLALPFVAGPYPVKLMTRIVIIATFVLSLDLLIGVTGLVSFGHAAFFGCGAYAVYFVSPE 79
           LL + F A    +   T +VI+A   + L+LL+G TGLVSFGHAA+FG G YA       
Sbjct: 21  LLPIVFQAIGLTLDSATVVVILAMAAMGLNLLVGYTGLVSFGHAAWFGIGGYAAGLAQLH 80

Query: 80  AEAANVIVALGAGLLAGGLAALVVGAFATLTRGFYFIMVTLAAGQMLFALFHDTDIAKGS 139
                +++ +   +L     +L+VG      RG YF ++TLA   + FA+        G 
Sbjct: 81  WFKNQMLLPMLFSVLFTAALSLIVGFLILRRRGVYFSLLTLALCALTFAISFRWTSLTGG 140

Query: 140 DGAYINVKPELTLAGLTLLDFSDRRQFYYVCVVVLIAAYGLLLALVRSPFGRVLQGIRAN 199
           +G    ++     A    +D +    +Y    ++  A   LL  +VRSPFG VL  IR N
Sbjct: 141 EGGLGGIER----ATFGPIDLNSHLSYYVFAALIGFAVLVLLHRIVRSPFGHVLVAIREN 196

Query: 200 EVRMSSLGYDTYRYKLAAFTIAGMVAGLAGALFASIDGFVTPDLLNWHQSGLAIMMVVLG 259
           + R +  GYD  RYKL AF ++  V GLAG+L   +      +    H SG  + MVV+G
Sbjct: 197 QQRATFQGYDVERYKLLAFVLSATVTGLAGSLMVFLHRLAAAESTAVHFSGELLAMVVIG 256

Query: 260 GAGTLFGPILGALAYSSLEELLKTASIVGSFVADHWRLGTGATLIAAVLMSPDGLAGLLN 319
           G  +  GP LGA+ +    EL        S   D+W L  G   +  ++ SP GL G+  
Sbjct: 257 GMHSFLGPALGAVFFLLFRELF-------SMWTDNWLLWFGLIFVGFIVFSPSGLTGI-- 307

Query: 320 WRRKQPQATPARPPAD----------------EPQRPAKTAKA-LATNHLSKNFNGIAAV 362
           W + Q +  P  PP D                E  RP +   A L  + +   F GI AV
Sbjct: 308 WGQIQRRLRP--PPEDGAAMSKRKIYEGLPLPEFLRPKRREGAVLEASEVGMRFGGIQAV 365

Query: 363 SDVTVTFEPNKVHAIIGPNGAGKTTFTNLLSGALPASAGSVQIDELDVTGWPAYRIARAG 422
               +  E  ++HA+IGPNGAGKTT  NL+SG  P S G+V++    +      RI + G
Sbjct: 366 RGANLRVEAGQIHALIGPNGAGKTTTFNLISGMFPPSTGTVRLHGQPIHQLAPDRICQQG 425

Query: 423 LGRSYQRTNIFPRFTVRENCALAAQLDKGA---LWRLRDA-PYRTREQAAVDRALRVAGL 478
           L RS+Q TN+F   T+ EN  L+ Q    A    WR  D+ P    E A + + L + G+
Sbjct: 426 LARSFQITNLFKGLTIEENLRLSLQARHAARFNFWRDIDSYPEIHAETAELMKFLGLQGM 485

Query: 479 ADRGDTIAGRMSNGEQRQLEIAMLIASGADLLILDEPLAGMGPEETQRVVALLRDLVRDH 538
              G    G +S G QR +++ + + S   +L++DEPLAG+   E +RV  L++ +  + 
Sbjct: 486 EAVG---GGDLSYGGQRLVDLGIALGSKPQVLLMDEPLAGLAAAERERVSRLVKTIASNI 542

Query: 539 TVIVIEHDMDAVFAAADTLTVLVQGKLFARGRPDEIRRNEAVLEAYLG 586
            V+++EHD+D V   +  +TV+ QG++   G PD++R ++ V E Y G
Sbjct: 543 PVLIVEHDIDRVLELSHRVTVMNQGEVLMSGTPDQVRDDQRVQEIYTG 590



 Score = 99.8 bits (247), Expect = 4e-25
 Identities = 69/246 (28%), Positives = 114/246 (46%), Gaps = 26/246 (10%)

Query: 337 PQRPAKTAKALATNHLSKNFNGIAA-------VSDVTVTFEPNKVHAIIGPNGAGKTTFT 389
           P    +T  A A   +  +F+ + A       ++D ++     ++ A++G NGAGK+T  
Sbjct: 594 PPVTGRTGVATADRPVVLDFHKVNAFYGKSHILNDASLQVREGEIVALLGRNGAGKSTLL 653

Query: 390 NLLSGALPASAGSVQIDELDVTGWPAYRIARAGLGRSYQRTNIFPRFTVRENCALAAQL- 448
             L G +P + G V  +  ++ G PA  IAR G+G   Q   +F   TV EN +L     
Sbjct: 654 KSLMGLVPPANGRVHFNGQELAGLPAPDIARRGVGYVPQGRGLFAGMTVAENLSLGRLAR 713

Query: 449 ----DKGALW-RLRDAPYRTREQAAVDRALRVAGLADRGDTIAGRMSNGEQRQLEIAMLI 503
                 G +W   R   Y  R             L +R    A  +S GEQ+ + +A  +
Sbjct: 714 PTDGSTGVVWDEARIFEYFPR-------------LKERMHVAADYLSGGEQQMVAVARAL 760

Query: 504 ASGADLLILDEPLAGMGPEETQRVVALLRDLVRDHTVIVIEHDMDAVFAAADTLTVLVQG 563
           +    LL+LDEP  G+ P   Q +  +   L +  +++++EH++D V A AD +  L +G
Sbjct: 761 SGNVKLLLLDEPFEGLAPTVVQELFTVFDKLRQHISIVIVEHNLDLVLALADRVYALERG 820

Query: 564 KLFARG 569
            +F  G
Sbjct: 821 AVFHEG 826