Pairwise Alignments

Query, 547 a.a., cyclohexanecarboxylate-CoA ligase from Rhodopseudomonas palustris CGA009

Subject, 548 a.a., short chain acyl-CoA synthetase, anaerobic (RefSeq) from Escherichia coli BW25113

 Score =  330 bits (847), Expect = 7e-95
 Identities = 201/533 (37%), Positives = 289/533 (54%), Gaps = 13/533 (2%)

Query: 11  RRAASIAAGLWHDRTINDDLDACVAHCPDKVALTAVRLDGGAVRRFSYRELATLADRVAV 70
           RRAA    GLW D ++ D         PDK+A+     + GA   ++Y  L   A  +A 
Sbjct: 11  RRAAYRQQGLWGDASLADYWQQTARAMPDKIAVVD---NHGA--SYTYSALDHAASCLAN 65

Query: 71  GLNRLGVGRGDVVAMQLPNWWQFTVLYLACSRIGAVLNPLMPIFRERELSFMLKHGDAKV 130
            +   G+  GD +A QLP W +FTV+YLAC +IGAV  PL+P +RE EL ++L    AK+
Sbjct: 66  WMLAKGIESGDRIAFQLPGWCEFTVIYLACLKIGAVSVPLLPSWREAELVWVLNKCQAKM 125

Query: 131 LVVPKSFRGFDHEAMARSLQPDLPALRTIVVVDGGGADDFDTLLTTPEWEKQPDAAAILQ 190
              P  F+      +   LQ  LP L+ IV VD          L+    +   D  ++  
Sbjct: 126 FFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDKLAPATSSLSLS----QIIADNTSLTT 181

Query: 191 GSRPSPDDITQLIYTSGTTGEPKGVMHSANTLMANIVPYAQRLALRESDVILMASPMAHQ 250
                 D++  +++TSGT G PKGVM + N ++A+   Y  RL L   DV +M +P+ H 
Sbjct: 182 AITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPLGHA 241

Query: 251 TGFMYGLMMPIMLRASAVLQDIWEPTKAAELIRTERVTFTMASTPFLTDLTRVVKESGEP 310
           TGF++G+  P ++ A +VL DI+ P     L+  +R T  + +TPF+ DL  V+++    
Sbjct: 242 TGFLHGVTAPFLIGARSVLLDIFTPDACLALLEQQRCTCMLGATPFVYDLLNVLEKQPAD 301

Query: 311 VPSLKTFLCAGAPIPGPLVEQAQAGLGAKIVSAWGMTENGAVTLIKLDDDDKLASTTDGC 370
           + +L+ FLC G  IP  +  + Q   G K++S +G TE+    ++ LDD       TDG 
Sbjct: 302 LSALRFFLCGGTTIPKKVARECQQ-RGIKLLSVYGSTESSPHAVVNLDDPLSRFMHTDGY 360

Query: 371 PLPGVEVKVIDGDGKTLPPNQIGRLVVRSCSNFGGYLKRPHW--NGTDADGWFDTGDLAY 428
              GVE+KV+D   KTLPP   G    R  + F GY   P       D +GW+ +GDL  
Sbjct: 361 AAAGVEIKVVDDARKTLPPGCEGEEASRGPNVFMGYFDEPELTARALDEEGWYYSGDLCR 420

Query: 429 MTADGYIRISGRSKDVIIRGGENIPVVEVEALLYKHPAVAQVAIVAYPDERLGERACAVV 488
           M   GYI+I+GR KD+I+RGGENI   EVE +L +HP +    +VA  DERLGER+CA V
Sbjct: 421 MDEAGYIKITGRKKDIIVRGGENISSREVEDILLQHPKIHDACVVAMSDERLGERSCAYV 480

Query: 489 VPKT-GASIDFAAMVEFLKAQKLALQYIPERLVVRDAMPATPSGKIQKFRLRE 540
           V K    S+    +V F   +++A    PE +VV + +P T SGKIQKF LR+
Sbjct: 481 VLKAPHHSLSLEEVVAFFSRKRVAKYKYPEHIVVIEKLPRTTSGKIQKFLLRK 533