Pairwise Alignments

Query, 547 a.a., cyclohexanecarboxylate-CoA ligase from Rhodopseudomonas palustris CGA009

Subject, 548 a.a., short chain acyl-CoA synthetase, anaerobic from Escherichia coli BL21

 Score =  333 bits (855), Expect = 8e-96
 Identities = 203/533 (38%), Positives = 291/533 (54%), Gaps = 13/533 (2%)

Query: 11  RRAASIAAGLWHDRTINDDLDACVAHCPDKVALTAVRLDGGAVRRFSYRELATLADRVAV 70
           RRAA    GLW D ++ D         PDK+A+     + GA   ++Y  L   A  +A 
Sbjct: 11  RRAAYRQQGLWGDASLADYWQQTARAMPDKIAVVD---NHGAT--YTYSALDHAASCLAN 65

Query: 71  GLNRLGVGRGDVVAMQLPNWWQFTVLYLACSRIGAVLNPLMPIFRERELSFMLKHGDAKV 130
            +   G+  GD +A QLP W +FTV+YLAC +IGAV  PL+P +RE EL ++L    AK+
Sbjct: 66  WMLAKGIESGDRIAFQLPGWCEFTVIYLACLKIGAVSVPLLPSWREAELVWVLNKCQAKM 125

Query: 131 LVVPKSFRGFDHEAMARSLQPDLPALRTIVVVDGGGADDFDTLLTTPEWEKQPDAAAILQ 190
              P  F+      +   LQ  LP L+ IV VD          L+    +  P   AI  
Sbjct: 126 FFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDKLAPATSSLSLSQIIADNIPLTTAITT 185

Query: 191 GSRPSPDDITQLIYTSGTTGEPKGVMHSANTLMANIVPYAQRLALRESDVILMASPMAHQ 250
                 D++  +++TSGT G PKGVM + N ++A+   Y  RL L   DV +M +P+ H 
Sbjct: 186 HG----DELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWLDVFMMPAPLGHA 241

Query: 251 TGFMYGLMMPIMLRASAVLQDIWEPTKAAELIRTERVTFTMASTPFLTDLTRVVKESGEP 310
           TGF++G+  P ++ A +VL DI+ P     L+  +R T  + +TPF+ DL  ++++    
Sbjct: 242 TGFLHGVTAPFLIGARSVLLDIFTPDACLALLEQQRCTCMLGATPFVYDLLNLLEKQPAD 301

Query: 311 VPSLKTFLCAGAPIPGPLVEQAQAGLGAKIVSAWGMTENGAVTLIKLDDDDKLASTTDGC 370
           + +L+ FLC G  IP  +  + Q  LG K++S +G TE+    ++ LDD       TDG 
Sbjct: 302 LSALRFFLCGGTTIPKKVARECQQ-LGIKLLSVYGSTESSPHAVVNLDDPLSRFMHTDGY 360

Query: 371 PLPGVEVKVIDGDGKTLPPNQIGRLVVRSCSNFGGYLKRPHW--NGTDADGWFDTGDLAY 428
              GVE+KV++   KTLPP   G    R  + F GY   P       D +GW+ +GDL  
Sbjct: 361 AAAGVEIKVVNDARKTLPPGCEGEEASRGPNVFMGYFDEPELTARALDEEGWYYSGDLCR 420

Query: 429 MTADGYIRISGRSKDVIIRGGENIPVVEVEALLYKHPAVAQVAIVAYPDERLGERACAVV 488
           M   GYI+I+GR KD+I+RGGENI   EVE +L +HP +    +VA PDERLGER+CA V
Sbjct: 421 MDEAGYIKITGRKKDIIVRGGENISSREVEDILLQHPKIHDACVVAMPDERLGERSCAYV 480

Query: 489 VPKT-GASIDFAAMVEFLKAQKLALQYIPERLVVRDAMPATPSGKIQKFRLRE 540
           V K    S+    +V F   +++A    PE +VV + +P T SGKIQKF LR+
Sbjct: 481 VLKAPHHSLSLEEVVAFFSRKRVAKYKYPEHIVVIEKLPRTASGKIQKFLLRK 533