Pairwise Alignments

Query, 520 a.a., DHA2 family efflux MFS transporter permease subunit from Rhodopseudomonas palustris CGA009

Subject, 512 a.a., predicted multidrug efflux system (NCBI) from Escherichia coli BW25113

 Score =  268 bits (685), Expect = 4e-76
 Identities = 147/430 (34%), Positives = 232/430 (53%), Gaps = 10/430 (2%)

Query: 18  VTICAMTATIMQALDTTIANVALPYMQGSLSASQDQINWVLTSYIVAAAIMTAPVGWIAN 77
           VTI    AT MQ LD+TI+NVA+P + G L AS D+  WV+TS+ VA AI     G +A 
Sbjct: 19  VTIALSLATFMQMLDSTISNVAIPTISGFLGASTDEGTWVITSFGVANAIAIPVTGRLAQ 78

Query: 78  RFGRKRIFIICSAGFTIASVMCGLAQDITQMVVFRLLQGVFGAALVPLSQAVMLDSYALH 137
           R G  R+F++    F+++S+MC L+ ++  ++ FR++QG+    L+PLSQ+++L +Y   
Sbjct: 79  RIGELRLFLLSVTFFSLSSLMCSLSTNLDVLIFFRVVQGLMAGPLIPLSQSLLLRNYPPE 138

Query: 138 ERAKAMSIWGMGVMMGPIMGPSLGAWLTETYSWHWVFFVNLPFGAITV-LGLAMFMDETD 196
           +R  A+++W M V++ PI GP LG ++ + +SW W+F +N+P G I + L L +      
Sbjct: 139 KRTFALALWSMTVIIAPICGPILGGYICDNFSWGWIFLINVPMGIIVLTLCLTLLKGRET 198

Query: 197 KNQELKFDWFGFAALAVGIGAMQLALDRGEQLDWFNSPEIIIESIVSVVGFYYFFAHSFT 256
           +   +K +  G   L +G+G +Q+ LD+G  LDWFNS  III ++VSV+          T
Sbjct: 199 ETSPVKMNLPGLTLLVLGVGGLQIMLDKGRDLDWFNSSTIIILTVVSVISLISLVIWEST 258

Query: 257 TERPFIQFAIFKDRNFVGGVVFMTVMGLVLFSTMALSSPFLQNVEGYPIMTAGLLLASRG 316
           +E P +  ++FK RNF  G+V +T   L     + L    LQ   GY  + AGL  A  G
Sbjct: 259 SENPILDLSLFKSRNFTIGIVSITCAYLFYSGAIVLMPQLLQETMGYNAIWAGLAYAPIG 318

Query: 317 CGTFVAMMIVGRIMRYIEARTLIATGLSLTCASLYVMTGWTDQTSVSSVVVTSII----- 371
               +   ++GR    I+ R L+     +     Y    W   T + ++  T II     
Sbjct: 319 IMPLLISPLIGRYGNKIDMRLLVTFSFLMYAVCYY----WRSVTFMPTIDFTGIILPQFF 374

Query: 372 QGFGFGLVFVPLSTVAFMTLPGQLRTDGTAMLTLVRNVASSVGISVVIAKLSSGTTTAHA 431
           QGF     F+PL+T++F  LP     + ++M    R ++ SVG S+ +       +  H+
Sbjct: 375 QGFAVACFFLPLTTISFSGLPDNKFANASSMSNFFRTLSGSVGTSLTMTLWGRRESLHHS 434

Query: 432 ILTEHINPFN 441
            LT  I+ FN
Sbjct: 435 QLTATIDQFN 444