Pairwise Alignments

Query, 520 a.a., DHA2 family efflux MFS transporter permease subunit from Rhodopseudomonas palustris CGA009

Subject, 512 a.a., multidrug efflux system protein from Escherichia coli BL21

 Score =  288 bits (738), Expect = 3e-82
 Identities = 157/485 (32%), Positives = 259/485 (53%), Gaps = 11/485 (2%)

Query: 6   QSHAVPGFRRNMVTICAMTATIMQALDTTIANVALPYMQGSLSASQDQINWVLTSYIVAA 65
           Q   + G +  ++TI    AT MQ LD+TIANVA+P + G+L +S  Q  WV+TS+ VA 
Sbjct: 3   QQKPLEGAQLVIMTIALSLATFMQVLDSTIANVAIPTIAGNLGSSLSQGTWVITSFGVAN 62

Query: 66  AIMTAPVGWIANRFGRKRIFIICSAGFTIASVMCGLAQDITQMVVFRLLQGVFGAALVPL 125
           AI     GW+A R G  ++F+  +  F IAS  CG++  +  ++ FR++QG+    L+PL
Sbjct: 63  AISIPLTGWLAKRVGEVKLFLWSTIAFAIASWACGVSSSLNMLIFFRVIQGIVAGPLIPL 122

Query: 126 SQAVMLDSYALHERAKAMSIWGMGVMMGPIMGPSLGAWLTETYSWHWVFFVNLPFG-AIT 184
           SQ+++L++Y   +R+ A+++W M V++ PI GP LG ++++ Y W W+FF+N+P G A+ 
Sbjct: 123 SQSLLLNNYPPAKRSIALALWSMTVIVAPICGPILGGYISDNYHWGWIFFINVPIGVAVV 182

Query: 185 VLGLAMFMDETDKNQELKFDWFGFAALAVGIGAMQLALDRGEQLDWFNSPEIIIESIVSV 244
           ++ L        + +  + D  G A L +GIG++Q+ LDRG++LDWF+S EIII ++V+V
Sbjct: 183 LMTLQTLRGRETRTERRRIDAVGLALLVIGIGSLQIMLDRGKELDWFSSQEIIILTVVAV 242

Query: 245 VGFYYFFAHSFTTERPFIQFAIFKDRNFVGGVVFMTVMGLVLFSTMALSSPFLQNVEGYP 304
           V   +      T + P +  ++FK RNF  G + +++  ++ F  + L    LQ V GY 
Sbjct: 243 VAICFLIVWELTDDNPIVDLSLFKSRNFTIGCLCISLAYMLYFGAIVLLPQLLQEVYGYT 302

Query: 305 IMTAGLLLASRGCGTFVAMMIVGRIMRYIEARTLIATGLSLTCASLYVMTGWTDQT---- 360
              AGL  A  G    +   I+GR    ++ R L+     +     Y    W   T    
Sbjct: 303 ATWAGLASAPVGIIPVILSPIIGRFAHKLDMRRLVTFSFIMYAVCFY----WRAYTFEPG 358

Query: 361 -SVSSVVVTSIIQGFGFGLVFVPLSTVAFMTLPGQLRTDGTAMLTLVRNVASSVGISVVI 419
               +      IQGF     F+PL+T+    LP +     +++    R +A S+G S+  
Sbjct: 359 MDFGASAWPQFIQGFAVACFFMPLTTITLSGLPPERLAAASSLSNFTRTLAGSIGTSITT 418

Query: 420 AKLSSGTTTAHAILTEHINPFN-NALQMPNVTGMIDLSTTTGKAMMDAIVTMQAQIIAFS 478
              ++  +  HA LTE +NPFN NA  M +    + ++       +   +T Q  II+ +
Sbjct: 419 TMWTNRESMHHAQLTESVNPFNPNAQAMYSQLEGLGMTQQQASGWIAQQITNQGLIISAN 478

Query: 479 HDYAM 483
             + M
Sbjct: 479 EIFWM 483