Pairwise Alignments

Query, 338 a.a., site-specific tyrosine recombinase XerD from Rhodopseudomonas palustris CGA009

Subject, 299 a.a., site-specific tyrosine recombinase XerD from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  178 bits (451), Expect = 2e-49
 Identities = 106/299 (35%), Positives = 164/299 (54%), Gaps = 13/299 (4%)

Query: 37  FLDMIAAEQGASANTLDAYRRDLADLSHFLSRRRLSIGSADT--AALRSYLADLDNRGFA 94
           F + +  E+  S ++++AY RD+  L  F+  + L +   D   A LR +L  ++  G  
Sbjct: 10  FEEYLKLEKSLSRHSVEAYERDVRKLVDFMDAKGLQVAPEDMKPAILRDFLEWINELGMT 69

Query: 95  TSSVARRLSALRHLFRFLLSERIRADDPAAILAGPKRGRSLPKVLSIADVDQLLACARQE 154
             S AR LS +R  ++FL+ E +   DP   +  PK  R LP  L+  +++QLL+    +
Sbjct: 70  PHSQARTLSGIRAFYKFLIMEDMMQTDPTDTIEAPKLDRKLPDTLAFHEIEQLLSAI--D 127

Query: 155 IDAAEGGARLRAARLNCLLEVLYATGLRVSELVSLPLSAARRDARMIVVRGKGDKERLVP 214
           +   EG       R   +LE LY++GLRVSEL+ L +S    DA  + + GKG+KERLVP
Sbjct: 128 LSTPEG------TRNRAMLETLYSSGLRVSELLDLRISNLYADAGFLKISGKGEKERLVP 181

Query: 215 LNAGAKQAMARYLEEMAAAKAPKDGPAPKWLFPSFGESGYLTRQHFARDLKDLAARAGLA 274
           +   A + +  Y + +      K G          G    ++R      +KDL A+AG+ 
Sbjct: 182 IGRDALKHIQLYRDGIRCHLNIKKGNEDILFLNRRGAK--MSRVMVFTIIKDLTAKAGIQ 239

Query: 275 PRLVSPHVLRHAFASHLLHNGADLRIVQTLLGHSDISTTQIYTHVVEERLKSLVRDLHP 333
            + VSPH  RH+FA+HL+  GADLR VQ +LGH  I+TT+IYTH+  + LK ++++ HP
Sbjct: 240 -KTVSPHTFRHSFATHLIEGGADLRAVQEMLGHESITTTEIYTHLDRDYLKQVIKEFHP 297