Pairwise Alignments

Query, 338 a.a., site-specific tyrosine recombinase XerD from Rhodopseudomonas palustris CGA009

Subject, 301 a.a., tyrosine recombinase XerD from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  171 bits (432), Expect = 3e-47
 Identities = 108/292 (36%), Positives = 161/292 (55%), Gaps = 13/292 (4%)

Query: 44  EQGASANTLDAYRRDLADLSHFLSRRRLSIGSADTAA--LRSYLADLDNRGFATSSVARR 101
           E+  S N++ AYRRD+  LS F+      I    T    LR+++++L + G +  + AR 
Sbjct: 19  ERSLSKNSISAYRRDMEKLSAFMKDAFPGITPLTTQLNHLRAFVSELASLGISEYTQARV 78

Query: 102 LSALRHLFRFLLSERIRADDPAAILAGPKRGRSLPKVLSIADVDQLLACARQEIDAAEGG 161
           +S ++  F+F++ E    +DPA +L  PK GR LP  LS  ++ +LL   +  +   EG 
Sbjct: 79  ISGVKAFFKFMVYEDKLEEDPAILLEAPKLGRKLPDTLSYEEIVKLLEGIK--LGTPEGH 136

Query: 162 ARLRAARLNCLLEVLYATGLRVSELVSLPLSAARRDARMIVVRGKGDKERLVPLNAGAKQ 221
                 R   +LEVLY++GLRVSELV L L     D   + + GKG+KERLVP+   A +
Sbjct: 137 ------RNRAMLEVLYSSGLRVSELVELKLGMVYSDIGFLRILGKGNKERLVPVGKDALR 190

Query: 222 AMARYLEEMAAAKAPKDGPAPKWLFPSFGESGYLTRQHFARDLKDLAARAGLAPRLVSPH 281
            +  YL+E+   +    G          G+   +TR      +K L    G+  + VSPH
Sbjct: 191 YLKLYLDEVRNHQKIAPGHEEYVFLNRRGKK--MTRVMVFIFIKKLVEEVGIKKK-VSPH 247

Query: 282 VLRHAFASHLLHNGADLRIVQTLLGHSDISTTQIYTHVVEERLKSLVRDLHP 333
             RH+FA+HL+  GADLR VQ +LGH  I+TT+IYTH+  E L+ ++ D HP
Sbjct: 248 TFRHSFATHLIEGGADLRAVQEMLGHESITTTEIYTHLDREYLRQVLTDFHP 299