Pairwise Alignments

Query, 883 a.a., translation initiation factor IF-2 from Rhodopseudomonas palustris CGA009

Subject, 890 a.a., translation initiation factor IF-2 from Escherichia coli BL21

 Score =  662 bits (1709), Expect = 0.0
 Identities = 389/900 (43%), Positives = 548/900 (60%), Gaps = 77/900 (8%)

Query: 2   VDTKTPGDKTLTMPTKTLTLKPRVEQGVVRQSFSHGRSKQVVVEKRGKRRLGGDEPAAPA 61
           ++ K  G   LT+  KT        +  +    + G+SK V +E R KR           
Sbjct: 49  LNQKNSGPDKLTLQRKT--------RSTLNIPGTGGKSKSVQIEVRKKRTF--------- 91

Query: 62  APEVAKKPAPAPAAPPRQQQSRPAPQQSRSGMVLRTLTEDERTARATALADARVREIEER 121
              V + P  A      +Q  R A +Q+R         E E +A+            E +
Sbjct: 92  ---VKRDPQEAERLAAEEQAQREAEEQARR--------EAEESAKR-----------EAQ 129

Query: 122 KQAEIEAQRRAEQEKIEKAEREAAEA----------RRKAEEERHRQEDEA---KRKAET 168
           ++AE EA  +A++E  E+A+REAAE            + A+ E+ R+E EA   KRKAE 
Sbjct: 130 QKAEREAAEQAKREAAEQAKREAAEKDKVSNQQDDMTKNAQAEKARREQEAAELKRKAEE 189

Query: 169 EAKKRFGD-----AEPAKKPAETSTTTTTAAPARPATTTTRTPTPAGRPPAVAAEAGDDD 223
           EA+++  +     AE A++ AE +  T  A P   ++    T +   R          +D
Sbjct: 190 EARRKLEEEARRVAEEARRMAEENKWTDNAEPTEDSSDYHVTTSQHARQA--------ED 241

Query: 224 EAPRMIRRPGGPARPAPPPKQPAAKPGASKQRGRLTVVTALNADDVRERSIASFRRRTQR 283
           E+ R +    G  R A   +       A  +  R     A+      +R  +S ++  Q+
Sbjct: 242 ESDREVEGGRGRGRNAKAARPKKGNKHAESKADREEARAAVRGGKGGKRKGSSLQQGFQK 301

Query: 284 LKGHASNEPKEKLVREVVIPEVIAIQELANRMSERAVDVIRLLMKQGAMHKITDVIDADT 343
                   P + + R+VVI E I + ELAN+M+ +   VI+ +MK GAM  I  VID +T
Sbjct: 302 --------PAQAVNRDVVIGETITVGELANKMAVKGSQVIKAMMKLGAMATINQVIDQET 353

Query: 344 AQLIAEELGHTVKRVAASDVEEGLFDVVDDSTDTEPRSPVVTVMGHVDHGKTSLLDALRH 403
           AQL+AEE+GH V     +++EE +    D     EPR+PVVT+MGHVDHGKTSLLD +R 
Sbjct: 354 AQLVAEEMGHKVILRRENELEEAVMSDRDTGAAAEPRAPVVTIMGHVDHGKTSLLDYIRS 413

Query: 404 ANVVSGEAGGITQHIGAYQVTSPESGKKITFIDTPGHAAFTAMRARGAKVTDIVVLVVAA 463
             V SGEAGGITQHIGAY V + E+G  ITF+DTPGHAAFT+MRARGA+ TDIVVLVVAA
Sbjct: 414 TKVASGEAGGITQHIGAYHVET-ENGM-ITFLDTPGHAAFTSMRARGAQATDIVVLVVAA 471

Query: 464 DDGVMPQTIEAINHAKAAGVPIIVAINKIDKPDAKPDRVRTDLLQHNVQVESMGGDVVDV 523
           DDGVMPQTIEAI HAKAA VP++VA+NKIDKP+A PDRV+ +L Q+ +  E  GG+   V
Sbjct: 472 DDGVMPQTIEAIQHAKAAQVPVVVAVNKIDKPEADPDRVKNELSQYGILPEEWGGESQFV 531

Query: 524 EVSAKNKINLDKLLEMIALQAEILELKTNTQRPAEGTVIEAKLDRGRGPVATVLVQRGTL 583
            VSAK    +D+LL+ I LQAE+LELK   +  A G VIE+ LD+GRGPVATVLV+ GTL
Sbjct: 532 HVSAKAGTGIDELLDAILLQAEVLELKAVRKGMASGAVIESFLDKGRGPVATVLVREGTL 591

Query: 584 RVGDIIVAGAEMGRVRALISDQGETVQEAGPSVPVEVLGFNGPPEAGDRLAVVENEARAR 643
             GDI++ G E GRVRA+ ++ G+ V EAGPS+PVE+LG +G P AGD + VV +E +AR
Sbjct: 592 HKGDIVLCGFEYGRVRAMRNELGQEVLEAGPSIPVEILGLSGVPAAGDEVTVVRDEKKAR 651

Query: 644 QITDYRAHQKREKSAASVSGMRGSLEQMMTQLKTSGRKEFPLIVKADVQGSLEAILGSLE 703
           ++  YR  + RE   A     +  LE M   +      E  +++KADVQGS+EAI  SL 
Sbjct: 652 EVALYRQGKFREVKLA--RQQKSKLENMFANMTEGEVHEVNIVLKADVQGSVEAISDSLL 709

Query: 704 KLGTDEVAARILHAGVGGISESDVTLAEGFNAVILGFSVRANKEAAAAAKRNGIEIRYYN 763
           KL TDEV  +I+ +GVGGI+E+D TLA   NA+++GF+VRA+  A    +   +++RYY+
Sbjct: 710 KLSTDEVKVKIIGSGVGGITETDATLAAASNAILVGFNVRADASARKVIEAESLDLRYYS 769

Query: 764 IIYDLVDDIKKAMSGLLAPTLRETMLGNAQILEIFNISKVGKVAGCRVTDGTVERGANVR 823
           +IY+L+D++K AMSG+L+P L++ ++G A++ ++F   K G +AGC VT+G V+R   +R
Sbjct: 770 VIYNLIDEVKAAMSGMLSPELKQQIIGLAEVRDVFKSPKFGAIAGCMVTEGVVKRHNPIR 829

Query: 824 LIRDNVVVHEGKLSTLKRFKDEVKEVVAGQECGMAFENYTDMRAGDIIECYRVETIQRSL 883
           ++RDNVV++EG+L +L+RFKD+V EV  G ECG+  +NY D+R GD+IE + +  IQR++
Sbjct: 830 VLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIGVKNYNDVRTGDVIEVFEIIEIQRTI 889