Pairwise Alignments

Query, 513 a.a., PLP-dependent aminotransferase family protein from Rhodopseudomonas palustris CGA009

Subject, 477 a.a., DNA-binding protein from Pseudomonas simiae WCS417

 Score =  175 bits (444), Expect = 3e-48
 Identities = 147/477 (30%), Positives = 211/477 (44%), Gaps = 12/477 (2%)

Query: 35  GGSFLQLQIRQIIVTAIEDGRLPLGMKMPSSRDLATVLKVSRNTVVIAYEQLVDQNFLVS 94
           G   L  Q+ Q +  AI  GRL  G ++P SR LA  L VSR TV   Y  L  +  L+ 
Sbjct: 9   GRKDLAEQLYQQLREAIGSGRLAAGAQLPPSRLLAQQLGVSRKTVSDTYATLTYEGLLIG 68

Query: 95  RQRSGYFVAGLPKKFATEAPGLAEVTSRGDEHWVDRFAVRPSAHRNIVKPLDWQTHPYPF 154
           +   G FV          AP         D       A   S    +  P    T  Y F
Sbjct: 69  KTGRGTFVNA-------RAPQTERQQGATDLACAANLAKWQSLPSPMRHPTRDSTLRYEF 121

Query: 155 IFGQFDPSLFPTNDWRESARAALSVPEINNWARDLIDGDDPALIEQLQLQVLPRRGIHAR 214
           I G    + FP ++WR   + AL     N+      +G  PAL   +   +   RG++ R
Sbjct: 122 IGGATSRNQFPQDEWRRCTQDALRRIAQNSGFYSQPEGL-PALRSAIAGHIAFSRGVNCR 180

Query: 215 ADEIMMTIGAQHALYLIATLFINGQTKVGIEEPGYPDARNIFRMLTPNVVPLSVDSEGVV 274
             +I++T GAQ AL LIA + +   + V +E+PGY  AR +F  +  +VV + VD +G+ 
Sbjct: 181 DSDIVVTNGAQQALDLIARVVLEPGSLVAMEDPGYSPARQMFMAMGASVVSVPVDEQGIR 240

Query: 275 PDAMFQSCALAYVTSSHQCPTAVTMPLPRRIELLKAAATGDVVVVEDDYEGELMPESATL 334
            D +     L YVT SHQ P  + M   RR  LL  A     +++EDDY+ E   E    
Sbjct: 241 VDRIPDGTRLIYVTPSHQFPLGMPMSPARREALLARAFELGAIIIEDDYDSEFRYEGRPT 300

Query: 335 PPLKSIDRASNVLYVGSLSKALAPGLRLGYVVAPAPVIRELRALRRLMLRHPPLNNQRVA 394
             L+S+D    V YVG+ SK L P LRLGY V P  +   +   ++L  +H     Q   
Sbjct: 301 DSLQSLDTRGVVAYVGTFSKTLLPELRLGYAVLPPAIYGAVLKAKQLTDQHSSTLPQWAL 360

Query: 395 ALFIGLGHYRAHLAQVGRVLLERAKLLDQLLPKHLPSCSFSRGPGSTNFWVT--CPTSID 452
           A FI  G+   H+ +   V   R + + Q L   L S  F   P    F +   C   ++
Sbjct: 361 AKFISEGYLLKHIRRCHTVYAGRRERILQRLAGDL-SPWFEAVPTVAGFHMAALCKVPVN 419

Query: 453 ATALAEAALEQGVVIEPGAVFSMDETASRHCFRLGFSSIRTDRIEVGIQRLGEVIAQ 509
              L E A    V + P  VF  D    R    +GF +I T  I+  + ++ +++ Q
Sbjct: 420 IPLLMELARRVEVGVYPLDVFFHD-APIRPGLIIGFGAIETLDIDPALDKVRDILLQ 475