Pairwise Alignments

Query, 231 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 415 a.a., LysM domain. from Pseudomonas stutzeri RCH2

 Score =  118 bits (296), Expect = 2e-31
 Identities = 78/240 (32%), Positives = 107/240 (44%), Gaps = 12/240 (5%)

Query: 2   LNSFLAHASMGAGAVSDGWSRHLDAIKETLGQIEQLHRDYLG--GGTIKARDEFYAKRMV 59
           L +  +H S   G +S    R L  ++ TL +I   + D L   G   +   EFYAKR  
Sbjct: 175 LETVASHQSTALGVLSAAAGRQLGNVRSTLEKINVAYVDELSRTGNPNRFSPEFYAKRQQ 234

Query: 60  LFIRLEEQLDRLAAYGSGLRKKGKAKRTLGISTKSYLH-------AGEIVGYAEKIAGVS 112
           LF +L   L RL      +R     K TLG+STKS LH        GE+    ++I  VS
Sbjct: 235 LFGQLNHSLGRLTLSTINIRNYDSIKTTLGLSTKSILHNASAITERGEVPQLGQRINTVS 294

Query: 113 KAANLIKNGTYIGIGLDVAATGLSIHQACTLGREDECAQARYVEGGALIGSIGGSIAGGA 172
             A       Y+GI +D      +I +ACT+G +  C Q  + +     GS GG   GG 
Sbjct: 295 NWAKGASRLGYLGIAIDGGVRLNAIQEACTVGNDQVCTQTSFKQVTGFFGSAGGGAVGGF 354

Query: 173 VGGAIATVVCTAV---LGIPTGGSGALACAVLGGTLGGKIGGDKGGQGGEYFGDILYRSV 229
            G  +AT V   +    G+  G       A+ G   G   GG +GG  GE  G I+YR +
Sbjct: 355 AGAKVATAVVGGIALAFGVTIGAPVLAVIAIAGAAAGAYYGGSEGGSFGEEVGTIIYRGI 414