Pairwise Alignments

Query, 304 a.a., putative D-alanine--D-alanine ligase from Pseudomonas putida KT2440

Subject, 334 a.a., D-alanine--D-alanine ligase from Vibrio cholerae E7946 ATCC 55056

 Score =  100 bits (249), Expect = 5e-26
 Identities = 91/322 (28%), Positives = 142/322 (44%), Gaps = 37/322 (11%)

Query: 5   IAIITGGNSSEREVSLQTSEAVSQSLKTLQISHEILT-------ISDYRELLSLDLAKFT 57
           I ++ GG SSE E+SL ++  + Q L+     H I          S+   L+ LD    T
Sbjct: 6   ILLLCGGGSSEHEISLVSANYIQQQLELTPEFHVIRVEMKKEGWFSEQGALVYLDTNSAT 65

Query: 58  R-----------VFLALHGGFGENGMAQAYLEGLGIPYNGPSPQASAICMDKLLTKHIAR 106
                       V   +HG  GE G  Q+ LE  GIPY G  P+ASA   +K+ +K    
Sbjct: 66  LNSDKASYPIDFVVPCIHGFPGETGDIQSMLELAGIPYLGCGPEASANSFNKITSKLWYD 125

Query: 107 GLGINVANYLYSKNGDDVCFEEISERLG--TPCIVKPNREGCSFGVSLVRDLKADLQPAI 164
            L I    YL+         ++  +  G      VK  R+G S G   V   +  + PAI
Sbjct: 126 ALDIPNTPYLFLTQNTPSSIDKAKQAFGHWGSIFVKAARQGSSVGCYKV-TTEDQIAPAI 184

Query: 165 NAAAKFHTGILIEEFISGPELSV--------CYLNKSTLPIYTVEFESDFFSYDAKFIST 216
            AA  F   +L+E+ +   EL V         Y++K   P   +  E  F+SY+ K+ + 
Sbjct: 185 EAAFGFSEQVLVEQAVKPRELEVSAYEMNGKLYISK---PGEVIAPEGTFYSYEEKYSAN 241

Query: 217 KTNATLTILDRSTH---QLVTNYCSAIAEALELDYF-RAD-FIVHNTEPYLIELNTLPGL 271
               T+   +  T    +L+  Y   +   ++L +  R D F+    + YL E+NT PG+
Sbjct: 242 SHARTVLEAENLTEKHKELIQTYAERVFIHMKLRHLSRIDFFLTQEGQIYLNEVNTFPGM 301

Query: 272 TSHSLFPKACQQHGIEFDKLVL 293
           T  S+FPK  + +G  F + ++
Sbjct: 302 TPISMFPKMLEHNGHRFSEFLV 323