Pairwise Alignments

Query, 304 a.a., putative D-alanine--D-alanine ligase from Pseudomonas putida KT2440

Subject, 319 a.a., D-alanine--D-alanine ligase from Pseudomonas syringae pv. syringae B728a

 Score =  152 bits (383), Expect = 1e-41
 Identities = 103/298 (34%), Positives = 156/298 (52%), Gaps = 15/298 (5%)

Query: 5   IAIITGGNSSEREVSLQTSEAVSQSLKTLQISHEILTISDYRELLSLDLAKFTRVFLALH 64
           +A++ GG S+ER VSL +  AV  +L    +    + + D   L  L   K  R F+ LH
Sbjct: 21  VAVLFGGKSAERAVSLNSGNAVLGALLEAGVDAFGIDVGD-DFLQRLVSEKIDRAFIVLH 79

Query: 65  GGFGENGMAQAYLEGLGIPYNGPSPQASAICMDKLLTKHIARGLGI-NVANYLYSKNGDD 123
           G  GE+G  Q  LE L IPY G    ASA+ MDKL TK + + LG+   A+ +     D 
Sbjct: 80  GRGGEDGTMQGLLECLEIPYTGSGVLASALAMDKLRTKQVWQSLGLATPAHAVLENESDC 139

Query: 124 VCFEEISERLGTPCIVKPNREGCSFGVSLVRDLKADLQPAINAAAKFHTGILIEEFISGP 183
           +C    +  LG P IVKP  EG S G++ V  +  +L  A  AA+ + + +L+E++I GP
Sbjct: 140 IC---AATELGLPLIVKPAHEGSSIGMAKVNSVD-ELIAAWKAASTYDSQVLVEQWIQGP 195

Query: 184 ELSVCYLNKSTLPIYTVEFESDFFSYDAKFISTKTNATL-----TILDRSTHQLVTNYCS 238
           E +V  L    LP   +     F+ YDAK++++ T   +        ++   QL    C 
Sbjct: 196 EFTVASLRGQVLPPIGLGTPHSFYDYDAKYLASDTQYRIPCGLGDAQEQELKQLAARACD 255

Query: 239 AIAEALELDYFRADFIVH-NTEPYLIELNTLPGLTSHSLFPKACQQHGIEFDKLVLIL 295
           AI  A    + R D +     + +L+E+NT+PG+T HSL P A +  G++F +LVL +
Sbjct: 256 AIGIA---GWARTDVMQDAQGKFWLLEVNTVPGMTDHSLVPMAARAAGLDFQQLVLAI 310