Pairwise Alignments

Query, 304 a.a., putative D-alanine--D-alanine ligase from Pseudomonas putida KT2440

Subject, 329 a.a., D-alanine--D-alanine ligase from Rhodopseudomonas palustris CGA009

 Score = 86.7 bits (213), Expect = 7e-22
 Identities = 90/319 (28%), Positives = 130/319 (40%), Gaps = 48/319 (15%)

Query: 7   IITGGNSSEREVSLQTSEAVSQSL------------KTLQISHEILT------------- 41
           I+ GG S ER VS+ +++A+  +L            +   +S + L              
Sbjct: 5   ILFGGTSKERLVSVASAQALHSALPDADLWFWNDDDRVHAVSAQALLAHARPFEEAFVPD 64

Query: 42  ---ISDYRELLSLDLAKFTRVFLALHGGFGENGMAQAYLEGLGIPYNGPSPQASAICMDK 98
              I      L    A+   + L LHGG  ENG  QA  E   +P+ G    AS +  DK
Sbjct: 65  GEDIGPLETALDRAAAEQRLLVLGLHGGVAENGELQAMCELRRVPFTGSGSAASHLAFDK 124

Query: 99  LLTKHIARGLGINVANYLYSKNGDDVCFEEISERLGTPCIVKPNREGCSFGVSLVRDLKA 158
           +  K  A   G+     +   + +     E   RL    I KP  +G S+G+  + + K 
Sbjct: 125 VAAKRFAAIAGVRTVTGIALADAEAAL--EAHGRL----IAKPACDGSSYGLFFI-NAKQ 177

Query: 159 DLQPAINAAAKFHTGILIEEFISGPELSVCYLNKS-----TLPIYTVEFESDFFSYDAKF 213
           DL  A+  AAK     LIE F++G E +   L         LP   +      F Y AK+
Sbjct: 178 DLV-AVRHAAKTED-YLIEPFVAGVEATCGVLEAEDGSLRALPPIEIVPADGGFDYTAKY 235

Query: 214 ISTKTNATLTILDRSTHQLVTNYCSAIAEALEL----DYFRADFIVHNTEPYLIELNTLP 269
           ++  T        R   ++ +        A  +     Y R+DFIV    P  +E NTLP
Sbjct: 236 LAKSTQEICP--GRFAPEIASAIMDYAVRAHRVMSCRGYSRSDFIVGKDGPIFLETNTLP 293

Query: 270 GLTSHSLFPKACQQHGIEF 288
           GLT  SL+PKA    GI F
Sbjct: 294 GLTKASLYPKALNALGIPF 312