Pairwise Alignments

Query, 304 a.a., putative D-alanine--D-alanine ligase from Pseudomonas putida KT2440

Subject, 306 a.a., D-alanine--D-alanine ligase Ddl from Phaeobacter inhibens DSM 17395

 Score =  106 bits (264), Expect = 8e-28
 Identities = 91/301 (30%), Positives = 141/301 (46%), Gaps = 25/301 (8%)

Query: 2   IENIAIITGGNSSEREVSLQTSEAVSQSLKTLQISHEILTISDYRELLS-LDLAKFTRVF 60
           +  +A++ GG S+EREVSL T    + +L+     +++  +    +L + L   +   VF
Sbjct: 8   LPKVAVLMGGPSAEREVSLSTGRECATALR--DEGYQVTELDAGPDLAARLQADRPDVVF 65

Query: 61  LALHGGFGENGMAQAYLEGLGIPYNGPSPQASAICMDKLLTKHIARGLGINVA-NYLYSK 119
            ALHG +GE+G  Q  LE LGIPY      ASA+ MDK   K I R  G+ V  + +YSK
Sbjct: 66  NALHGRWGEDGCVQGLLEWLGIPYTHSGVLASALAMDKQRAKSIYRAAGLPVVESGIYSK 125

Query: 120 NGDDVCFEEISERLGTPCIVKPNREGCSFGVSLVRDLKADLQPAINAAAKFHTGILIEEF 179
              +V    +   +  P +VKPN EG S GV LV ++ A+  P +  +      +++E F
Sbjct: 126 --AEVMAGHV---MAPPYVVKPNNEGSSVGVYLVNEV-ANGPPQL--SQDMPDEVMVESF 177

Query: 180 ISGPELSVCYLNKSTLPIYTVEFESDFFSYDAKFISTKTNATLTILDRSTHQLVTNYCSA 239
             G EL+   L    L +  +     ++ YDAK+   K   +  +L     + +   C  
Sbjct: 178 APGRELTTTVLGDKPLTVTDI-LTDGWYDYDAKY---KPGGSRHVLPADVPEEIFALCLD 233

Query: 240 IA---------EALELDYFRADFIVHNTEPYLIELNTLPGLTSHSLFPKACQQHGIEFDK 290
            A           +    FR D         L+E NT PG+T  SL P+  +  G+ F +
Sbjct: 234 YAVKAHDALGCRGISRTDFRWDEARGAEGLILLETNTQPGMTPTSLTPEQAEHSGMTFGQ 293

Query: 291 L 291
           L
Sbjct: 294 L 294