Pairwise Alignments

Query, 304 a.a., putative D-alanine--D-alanine ligase from Pseudomonas putida KT2440

Subject, 324 a.a., D-alanine--D-alanine ligase from Caulobacter crescentus NA1000

 Score =  118 bits (296), Expect = 2e-31
 Identities = 98/304 (32%), Positives = 152/304 (50%), Gaps = 24/304 (7%)

Query: 4   NIAIITGGNSSEREVSLQTSEAVSQSLKTLQIS-HEILTISDYRELLSLDLAKFTRVFLA 62
           +IA++ GG SSER+VSL +  A +++L+ L      I    D  ++L+    K   VF A
Sbjct: 15  HIAVLLGGPSSERKVSLVSGAACAEALERLGAKVSRIDPGPDVAQVLAA--TKPDMVFNA 72

Query: 63  LHGGFGENGMAQAYLEGLGIPYNGPSPQASAICMDKLLTKHIARGLGINV-ANYLYSKNG 121
           LHG +GE+G  Q  LE L +PY      ASA+ MDK   K +    G+ V    L++++ 
Sbjct: 73  LHGEWGEDGCVQGVLETLKLPYTHSGVLASALAMDKAKAKAVLAAAGVTVPGGGLFNRH- 131

Query: 122 DDVCFEEISERLGTPCIVKPNREGCSFGVSLVRDLKADLQPAINAAAKFHTG--ILIEEF 179
            DV  + +   L  P +VKPN EG S GV ++++  A+  P    A  +  G  +++E +
Sbjct: 132 -DVARDHV---LQPPYVVKPNAEGSSVGVFIIKE-GANRPPEEVGAPSWTFGEEVMVEPY 186

Query: 180 ISGPELSVCYLNKS----TLPIYTVEFESDFFSYDAKFISTKTNATL------TILDRST 229
           I G EL+V  L +S     L +  +   + F+ Y+AK+    +   L       + DR+ 
Sbjct: 187 IQGMELAVAVLGESNGPRALAVTDIRASTGFYDYEAKYSEGGSIHVLPAPIPNAVRDRAM 246

Query: 230 HQLVTNYCSAIAEALELDYFRADFIVHNTEPYLIELNTLPGLTSHSLFPKACQQHGIEFD 289
                 + +     +    FR D I  N    L+E+NT PG+T  SL P+     GI FD
Sbjct: 247 RMAELAHTALGCRGVTRSDFRYDDI--NDLLVLLEVNTQPGMTPTSLAPEQADHVGIPFD 304

Query: 290 KLVL 293
           +LVL
Sbjct: 305 QLVL 308