Pairwise Alignments

Query, 397 a.a., putative ABC transporter, substrate-binding protein from Pseudomonas putida KT2440

Subject, 395 a.a., hypothetical protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  260 bits (664), Expect = 6e-74
 Identities = 153/393 (38%), Positives = 218/393 (55%), Gaps = 18/393 (4%)

Query: 12  LLALAATLATPLAPAAQGQAAAPLHIRIGYLGYRPAAGPLLSNIIPEPGDAGLQGAELAI 71
           L A +   + P+A A   +AA    +R+ Y    P     +S     P D G  GA LA 
Sbjct: 9   LAAFSLLTSAPVALAIDVRAAV---LRVDYQTLLP-----ISRYDLRPEDLGFAGAALAD 60

Query: 72  VDSNSTGRFLKQQFQLTSANVDSPEALLQAARAQHDQGLRVFVVNAPAASLRALS--AAL 129
            D+ +TG FL   ++  +    + +A  +A  A   +G+ + V+ A    L  L+  AA 
Sbjct: 61  EDNGTTGSFLGHTYETRAVATTAADAG-EALEALLAEGVDIIVILARFEDLLRLTDRAAE 119

Query: 130 PDSLLFNAGSPDDSLRSSQCLGNVLHSLPSRAMLADALAQFLVLRKWQRALLVVGQTPDD 189
             +L+FNA +PD +LR  QC GN+LH+ PSR M  DA+AQFLV ++W+   L+ G  P D
Sbjct: 120 AGALVFNALAPDMALRDDQCRGNLLHTAPSRRMNTDAVAQFLVWKQWKNWFLISGSNPAD 179

Query: 190 QAYAAALRRSVKRFGVQLVAEKTWTFDNDQRRS------AQADMPLFTQ-TAEYDVVLVA 242
            A A + R S ++FG ++  E+   +    RR+       Q  +P FTQ  A +DV++ A
Sbjct: 180 VALADSYRFSARKFGARITEERVLEYSGGSRRTDSGHVLVQRQLPNFTQGAAGHDVLVAA 239

Query: 243 DERGDFGEYLPYQTWYPRPVAGTQGLTPTGWHKTVETFGAAQLQKRFEAQAGRWMNDRDF 302
           DE   F  YL Y  W PRPVAG+ GL PT +H   E +GA Q Q RFEA AGR+    D+
Sbjct: 240 DETDYFARYLSYHLWTPRPVAGSGGLVPTTFHGAHEAYGATQFQTRFEALAGRYAKPEDY 299

Query: 303 AAWMAVRSVASAASKLRLAEPRALQQLLLSEQLPLDGFKGRKLSYRPWNGELRQPIPLVQ 362
             W+A+R V  A ++   A P  L+   +S+   L  FKG+K+++R WNG+LRQPI L  
Sbjct: 300 NVWLALRVVGEAVTRANTANPMELRDYAISDAFELAAFKGQKVTFRDWNGQLRQPILLHD 359

Query: 363 PRALVSTSPQEGFLHPFNEMDSLGYDKPEVTCS 395
               VS SPQ+GFLH  + +D+LG D+PE  CS
Sbjct: 360 GSITVSVSPQDGFLHQHSALDTLGLDEPESACS 392