Pairwise Alignments

Query, 293 a.a., conserved protein of unknown function with RHS repeat-associated core domain from Pseudomonas putida KT2440

Subject, 1695 a.a., YD repeat protein from Pseudomonas fluorescens FW300-N2E2

 Score =  102 bits (255), Expect = 5e-26
 Identities = 57/146 (39%), Positives = 79/146 (54%), Gaps = 3/146 (2%)

Query: 2    LYLYSNDEITTTLQDNGASSILRANVHALFFVHKQSGNERTELLACDVKGSTLMLLTIKS 61
            L LY  DE++ T+Q    +    A    L   H+     +  LL  D  GS L      +
Sbjct: 1268 LRLYQGDELSYTVQSAAQTHFFTAADQVLG-QHQPGDPSKNLLLFTDANGSVLGECQGAA 1326

Query: 62   TARVVFSPWGYFQAAGGMLA--GFKGEYCDPVTSYYLLGNGYRGYNPMLMRFANPDSVSP 119
                ++S +G   +   +L+   F GE  +  + +YLLGNGYR YNP+LMRF +PDS SP
Sbjct: 1327 LRAAIYSAYGERSSEEPLLSVRAFNGEVRESSSGWYLLGNGYRAYNPVLMRFHSPDSFSP 1386

Query: 120  FGAGGINCYAYLAGDPVNASDPTGHM 145
            FGAGG+N Y Y  G+P+   DPTGH+
Sbjct: 1387 FGAGGVNPYCYCLGNPIRFKDPTGHV 1412