Pairwise Alignments

Query, 293 a.a., conserved protein of unknown function with RHS repeat-associated core domain from Pseudomonas putida KT2440

Subject, 365 a.a., YD repeat protein from Pseudomonas fluorescens FW300-N2E2

 Score =  112 bits (279), Expect = 2e-29
 Identities = 64/141 (45%), Positives = 81/141 (57%), Gaps = 5/141 (3%)

Query: 5   YSNDEITTTLQDNGASSILRANVHALFFVHKQSGNERTELLACDVKGSTLMLLTIKSTAR 64
           YS   I T +Q  G    L    +A+     Q G  +  LLA D++ S L ++   S   
Sbjct: 41  YSGSRIVTEIQ--GECKTLFFEHNAMPLAEIQQGR-KVNLLATDLQTSVLNVINSVSHHP 97

Query: 65  VVFSPWGYFQAAGGM--LAGFKGEYCDPVTSYYLLGNGYRGYNPMLMRFANPDSVSPFGA 122
             +SP+G+    GG+  L GF GE  DPVT +YLLG GYR YNP+LMRF +PD+ SPF  
Sbjct: 98  QTYSPYGHRPMGGGLQSLLGFNGERPDPVTGHYLLGGGYRAYNPVLMRFNSPDAFSPFDR 157

Query: 123 GGINCYAYLAGDPVNASDPTG 143
           GGIN YAY + DPVN  DP G
Sbjct: 158 GGINPYAYCSNDPVNRVDPNG 178