Pairwise Alignments

Query, 511 a.a., transposase from Pseudomonas putida KT2440

Subject, 537 a.a., IS66-like element ISBvu3 family transposase from Parabacteroides merdae CL09T00C40

 Score =  216 bits (549), Expect = 2e-60
 Identities = 161/520 (30%), Positives = 248/520 (47%), Gaps = 41/520 (7%)

Query: 13  EQLRALAAQALQLQSQVEAMSRKIQNDEILIEQFKFEIALLKRHKFAKRSEQIS---PAQ 69
           E  R L     +L  Q   + +K+Q    L+ Q    +A L R  F ++SE+++   P Q
Sbjct: 23  ETNRTLVESNQKLMEQTGELQQKVQE---LLSQ----VAWLNRQLFGRKSEKLASLDPNQ 75

Query: 70  GSLLDDLL-----DTDLEAIEAELKQLLPASSQAEPRQSPKRAPLPPQFPRAVIRHEPEN 124
            +L D L      +TDL       +   P   + E R++ +   L    P   +  EP+N
Sbjct: 76  LALFDTLANPRQEETDLVETGVGTRTCKPDGKKKESRRNRE---LLEGLPVVEVIVEPDN 132

Query: 125 TQCACGCQLQRIGEDVSEKLDYTPGVFTVEQHVRGKWACRQCETL--------IQAPVPA 176
                  + +RIGE+ +  L++ PG   V++ VR K+  +   +L        I AP+P 
Sbjct: 133 VDLN---RYRRIGEERTRTLEFEPGKLYVKETVRPKYGLKNNLSLPKEGESGVIIAPLPP 189

Query: 177 QVIDKGIPTAGLLAHVMVAKFADHLPLYRQEKILGRAGLAIARSTLAQWVGQTGVRLQPL 236
             I K +    LLA +++ K+  H+P YRQ K     G+ +  STL+ W       L PL
Sbjct: 190 SPIYKCLAGPSLLAEILLQKYEYHVPFYRQVKEYRHLGVRLPESTLSGWFKPVCELLSPL 249

Query: 237 VDALREAVLKQGVIHADETPVQMLAPGEKKTHRAYVWAYSTTPFSALNAVVYDFSPSRAG 296
              L + V   G +  DET V+++  G+ KT + Y+W         L    YD   SR+G
Sbjct: 250 YSELVKLVTGSGYVQVDETTVRVINKGKGKTDKEYLWMVRAA-MEKLVIFHYD-DGSRSG 307

Query: 297 EHARNFLGDWSGKLVCDDFAGYKAGFE--QGITEIGCMAHARRKFFDLHVANKSQLAEQA 354
           +  RN L D+ G L  D ++ Y A F+  + +  I C+AH RR   +L +     LAE A
Sbjct: 308 QTIRNLLKDFKGYLQSDGYSAYNA-FDGTKDVCLIACLAHIRRHM-ELALDENRSLAEYA 365

Query: 355 LHSISGLYEVER--QAREMSDEDRWRIRQELAVPISKTLHEWMLAQRDLVPNGSATAKAL 412
           L  I  LY +E+   AR++  + R  +RQ LA PI  +  +WM      VP  S   +A+
Sbjct: 366 LKQIQELYHIEQIADARKLDAQGRCALRQRLATPILDSFEKWMEQTYGKVPPRSRMGQAI 425

Query: 413 DYSLKRWVALTRYLDDGSVPIDNNQVENQIRPWALGRSNWLFAGSLRSGKRAAAIMSLIQ 472
            Y+   W  +  YL DG++ IDNN  EN IRP  L R N+LF G+  + +  A I SL+ 
Sbjct: 426 TYTYPLWPRMKNYLKDGNLKIDNNLAENAIRPLTLSRKNFLFCGNHEAAENTAIICSLLA 485

Query: 473 SARMNGHDPYAYLKDVLTRLP----TQRASEIGQLLPHQW 508
           + +    +P  +L DV+ +LP          + +LLP  W
Sbjct: 486 TCKAQEINPREWLNDVIAKLPYYLERDSGKNVRELLPDVW 525