Pairwise Alignments

Query, 511 a.a., transposase from Pseudomonas putida KT2440

Subject, 523 a.a., IS66 family transposase from Parabacteroides merdae CL09T00C40

 Score =  119 bits (299), Expect = 2e-31
 Identities = 127/518 (24%), Positives = 225/518 (43%), Gaps = 51/518 (9%)

Query: 13  EQLRALAAQALQLQSQVEAMSRKIQNDEILIEQFKFEIALLKRHKFAKRSEQIS-PAQGS 71
           EQL  L A+   L S + ++ + +      +E  + ++ +L +    K+SEQ+S P +G+
Sbjct: 33  EQLNILTAEVKSLNSSILSLEKALLEKNASLEGQQSKVRILGKMVSGKKSEQVSVPDKGT 92

Query: 72  LLDDLLDTDLEAIEAELKQLLPASSQAEPRQSPKRAPLPPQFPRAVIRHE--PENTQCAC 129
                  T +  ++  LK+           +    A     F      H+  P+  +   
Sbjct: 93  -------TIIAKVKPSLKE-----------RGNNGARRKEYFNLETCHHDIYPDAAEFKV 134

Query: 130 GCQLQRIGEDVSEKLDYTPGVFTVEQHVRGKWACRQCETLIQAPVPAQVIDKGIPTAGLL 189
             + ++I      + ++ P  F    + +  +AC+   T+    +PA  +      A  +
Sbjct: 135 E-EGKKIRTTDCIRYEFIPPRFIKHIYHQHYYACKG--TVYAGSLPAVPLLNSNYDASFI 191

Query: 190 AHVMVAKFADHLPLYRQEKILGRAGLAIARSTLAQWVGQTGVRLQPLVDALREAVLKQGV 249
           A ++  ++   +P+ R  K+    G  + ++T    + +       + D L+E VL    
Sbjct: 192 AGILQLRYIYSMPVERIIKLFAEHGFEMNKATAHGLIKKAAGLFDLVEDVLKETVLSDNY 251

Query: 250 IHADETPVQMLAPGE-----KKTHRAYVWAYSTTPFSALNAVVYDFSPSRAGEHARNFLG 304
           +  DE+   +L         K T + Y+WA        ++    + S SR  +    +L 
Sbjct: 252 LSMDESYYTVLTSDTNNSSGKSTAKGYIWAALANHLKLVHFFYENGSRSR--KVLTGYLR 309

Query: 305 -DWSGKLVCDDFAGYKAGFEQGITE---IGCMAHARRKFFDLHVANKSQLAEQALHSISG 360
            D+ G +  D    YK   ++   +   + C  H +RKF ++   NK   AE+ +  I+ 
Sbjct: 310 EDYRGAIQSDGLGNYKIIEKEAYPDAIRLSCFQHCKRKFLNI-TGNKD--AEKIVRIINR 366

Query: 361 LYEVERQAREMSDEDRWRI---RQELAVPISKTLHEWMLA---QRDLVPNGSATAKALDY 414
           LY+ E   R   D    +I   R + A PI K L E ++    ++  +P  S  +KA++Y
Sbjct: 367 LYQNEH--RIPPDWTACQILDYRNKYAPPILKELKEELINIKNKKSTLPK-SELSKAINY 423

Query: 415 SLKRWVALTRYLDDGSVPIDNNQVENQIRPWALGRSNWLFAGSLRSGKRAAAIMSLIQSA 474
           +L  + AL  Y+       DNN +E  +R  +L R N LF GS +  KRAA I SL  S 
Sbjct: 424 TLNEYDALCNYIRSADYAPDNNAIERLMRYISLSRRNSLFCGSHQGAKRAALIYSLACSC 483

Query: 475 RMNGHDPYAYLKDVLTRL----PTQRASEIGQLLPHQW 508
           R+N  + + Y KD+LT+L    P      I  LLPH+W
Sbjct: 484 RLNNINSFEYFKDLLTKLIDINPNTDHETIRNLLPHKW 521