Pairwise Alignments

Query, 417 a.a., metal RND efflux outer membrane protein, CzcC family from Pseudomonas putida KT2440

Subject, 419 a.a., TolC family protein from Rhodanobacter denitrificans FW104-10B01

 Score =  213 bits (543), Expect = 7e-60
 Identities = 145/412 (35%), Positives = 208/412 (50%), Gaps = 5/412 (1%)

Query: 4   LCSHSGRMLAAALVLLLPALSAQANS--LTLDDALQLAERNAPSLQARQEQASAARHSVV 61
           L  +  R L  A ++LLP  +A A    LTL+ A++     AP L+AR    +A R    
Sbjct: 2   LSIYFARHLMVAGLVLLPWAAAHAAEPPLTLETAVRQGLARAPQLEARAADIAATREEAA 61

Query: 62  PAGELPDPRLNLGVQNLPVDGSDRWSTNRDFMTMQVVGLSQEVPNRDKRKARVETAQATV 121
            AG+LPDP L  G+ N PV     +S   D MT + VG+ Q +P+R  R+A    A A V
Sbjct: 62  RAGQLPDPTLTFGLSNYPVTSPGAFSLRSDEMTARTVGVMQAIPSRTARRAERALASARV 121

Query: 122 ERADAEALFERLKVRAATAQAWITAYTLQRKLQQFDMLFNENRLLAAAVRARLAAGGGAS 181
           + A A+++     VR   A AWI  +  +++      L +E  L     +ARL  G G++
Sbjct: 122 DAAQADSVVAAQGVRERIADAWIDVWAAEQQHALLLGLHDEAALAWRIAQARLRGGEGSA 181

Query: 182 ADALAPGQEAAQLEEQKDQLLTQATQARAALKRWIGQDADAQAPA--FPQWPVRAPDYLH 239
            DALA   E A L+ + +        A+A L+RW+G    A A    F + PV A   + 
Sbjct: 182 VDALAARAEMATLDNRIEAAEVDLAAAQAGLQRWLGTSPGALAATQDFSRLPVDADRLVS 241

Query: 240 TLHAHPELAAYGAMTREAQAQVQQAIAEKKSDWGWQVDYQRRGPEFSNMVSVQVSFQLPL 299
           T+     L A+ A  + AQA ++QA A +  DW     Y RR P  S+MV ++V   LPL
Sbjct: 242 TVDRQAPLQAWAAREQVAQAALEQARAARHPDWSVSASYGRRAPGLSDMVMLEVGVSLPL 301

Query: 300 FSGSRQDPMIAARRAQVRQLEDEQEAALREHTAQLEADLAEYQRLQRAVTRSRDTLLPLA 359
           F+ +RQD  I+AR+AQ   ++ ++E A R     +   LA +Q   R + R + TLLPLA
Sbjct: 302 FTRNRQDRGISARQAQWDAVQADREDARRAQREVVTRALAAWQGWGRQIARYQQTLLPLA 361

Query: 360 EQRVSLALADYRAGKSALEEVLTARRQRVEARLQDIDLQGQLAATAARLHFV 411
             R   ALA YR G  +L+  L ARR  +E RL   D     A   A L ++
Sbjct: 362 RDRAQTALAGYR-GSGSLQPWLDARRAEIELRLGYADALAARARLWASLAYL 412