Pairwise Alignments

Query, 417 a.a., metal RND efflux outer membrane protein, CzcC family from Pseudomonas putida KT2440

Subject, 417 a.a., TolC family protein from Rahnella sp. WP5

 Score =  168 bits (425), Expect = 3e-46
 Identities = 112/387 (28%), Positives = 188/387 (48%), Gaps = 3/387 (0%)

Query: 10  RMLAAALVLLLPALSAQANSLTLDDALQLAERNAPSLQARQEQASAARHSVVPAGELPDP 69
           RM    L+  +P +SA A  +TL  AL  A+  +  L A + Q +A  +    A +LPDP
Sbjct: 9   RMTWQWLLAFVP-VSAFATPVTLPQALVAAQDYSAELSASRHQINALDNRADSAMQLPDP 67

Query: 70  RLNLGVQNLPVDGSDRWSTNRDFMTMQVVGLSQEVPNRDKRKARVETAQATVERADAEAL 129
           +L  G++NLPV G +     R+ MTM+ +G+ Q+  + DKR+ + +T +A      A   
Sbjct: 68  KLKFGIENLPVSGGNTDRFTREGMTMERIGIMQDYISSDKRQRKADTLRAESREVAAIRQ 127

Query: 130 FERLKVRAATAQAWITAYTLQRKLQQFDMLFNENRLLAAAVRARLAAGGGASADALAPGQ 189
             R +++   A AW+      + + Q   L +E++      R  +++G    A  L    
Sbjct: 128 SIRARLQRDAALAWMELAIGGQTVSQLQKLVDESQRQIGVQRGGVSSGSSLPASVLDAHL 187

Query: 190 EAAQLEEQKDQLLTQATQARAALKRWIGQDADAQAPAFPQWPVRAPDYLH--TLHAHPEL 247
               ++++  +       AR  L +  G D      A P +    P  L   ++  HPE+
Sbjct: 188 TLISMQDKLTEAERDVQLARTRLSQLTGIDQPEINGAIPPFTELPPQALQATSVEQHPEI 247

Query: 248 AAYGAMTREAQAQVQQAIAEKKSDWGWQVDYQRRGPEFSNMVSVQVSFQLPLFSGSRQDP 307
                    AQA+  Q+      D G +V Y  R   + ++  V  +  LPLF+ SRQD 
Sbjct: 248 IQARREADVAQAKSSQSAIAALPDVGVEVYYAHRADSYEDLAGVMFTVDLPLFTASRQDK 307

Query: 308 MIAARRAQVRQLEDEQEAALREHTAQLEADLAEYQRLQRAVTRSRDTLLPLAEQRVSLAL 367
             AA ++   +  D     +R+H AQL + LA+YQ       R ++ ++PL +QR+S+  
Sbjct: 308 DHAADQSMAMESNDRLAQLMRDHQAQLTSLLAQYQAAATLWQRQKNDVIPLQQQRISVIQ 367

Query: 368 ADYRAGKSALEEVLTARRQRVEARLQD 394
           A YRAGKS+L +VL ARR  +++++ +
Sbjct: 368 AQYRAGKSSLNDVLDARRNLIDSQISE 394