Pairwise Alignments

Query, 302 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

 Score =  164 bits (415), Expect = 2e-45
 Identities = 101/292 (34%), Positives = 157/292 (53%), Gaps = 9/292 (3%)

Query: 6   LPPLNSLHAFESAARHLSFTLAAKELNVTQGAISRQVRLLEDYLGKALFTRTTRSMSLTP 65
           LPPLNSL  FE+AARHLSFT AA+EL VTQ A+S Q++ LE++LG  LF R  RS+ LT 
Sbjct: 5   LPPLNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRNRSLLLTE 64

Query: 66  TGAQYYETVRECMLHLARATGDIRQWQGNQQVTVATSTAMASLWLLPKVSEFQSAHENID 125
            G  Y+  +++    LA AT  + +      +T++   + A  WL+P++++F     +ID
Sbjct: 65  EGQSYFLDIKDIFSSLAEATDKLLERSEKGALTISLPPSFAIQWLVPRLADFNQQEPDID 124

Query: 126 LRIIAHDHVKDYARLDSDLALYYCNPPPKDMAVTPLFSEEIFLVCSPAYLARHPQLSSIE 185
           +RI A D  +     D D+A+YY       +    L+ E +  +CSPA L  +  +  + 
Sbjct: 125 VRIKAVDMDEGSLTDDVDVAIYYGRGSWPGLRADKLYQEFLIPLCSPALLLGNKPMEKLS 184

Query: 186 GLSSCTWLWLEDSQRDWVGWPEWFKRLGYEPMTPKHRVNINSYGMLIQSAISGQGVALAW 245
            L+  T L  + S++D   W ++ K  G + +   H    +   M++Q+A  GQGVAL  
Sbjct: 185 DLAYHTLLH-DTSRKD---WKQFAKENGLDNVNVNHGPIFSHSTMVLQAAAHGQGVALGN 240

Query: 246 GNLVDDALSTGALVKPNDVVLQTDAKFCLL--ESSTERGPRESVRLFRDWLM 295
             L    +  G L+ P D VL T+  F ++  E   + G    +  FRDW++
Sbjct: 241 NVLAQPEIDAGRLIAPFDEVLMTNNAFYVVCHEKQADMG---RIATFRDWML 289