Pairwise Alignments

Query, 567 a.a., Choline/carnitine/betaine transporter family protein from Pseudomonas putida KT2440

Subject, 685 a.a., choline/carnitine/betaine transport from Pseudomonas stutzeri RCH2

 Score =  400 bits (1027), Expect = e-115
 Identities = 213/506 (42%), Positives = 316/506 (62%), Gaps = 26/506 (5%)

Query: 15  VTIWSLLAVVAFVLFCALFAEHAAAVFQRASDFILQNFKWFYLISVTGVLGLLIYLMCSK 74
           V I +++  +  V+      E A  VF     FI  NF WFY++SV   L  ++ +  + 
Sbjct: 16  VFIPAVIVTLLLVIGTISNPELAGEVFSSTLAFITTNFGWFYMLSVAFFLVFIVGIAMTP 75

Query: 75  FGSMKLGRDDDKPEFSFGSWIAMLFSGGMGIGLIFWSVAEPMWHYAGNPFATGLTDEAAT 134
           +GS+KLG D  +P++SF +W AMLFS G GI L+F+ VAEP+ HYA  P   G T +AA 
Sbjct: 76  WGSIKLGPDHAEPQYSFPAWFAMLFSAGYGIALLFFGVAEPVLHYASPPAGAGETVDAAK 135

Query: 135 TAMRITLFHWGLHPWAIFTIVGLGLAYFAYRKGLPLSMRSILYPLIGERIYGPIGHVVDI 194
            AM+I  FHWG H WAI+ + GL LAYF++R GLPLSMRS LYP+IGERI+GPIGHVVDI
Sbjct: 136 QAMQIAFFHWGFHIWAIYGLTGLVLAYFSFRHGLPLSMRSALYPIIGERIHGPIGHVVDI 195

Query: 195 LAVVITAFGVSQSLGLGVVQMNTGLSQVF-DLPISLGVQITLIVLITLVTTVSVMAGVSR 253
            A++ T FG++ +LGL V Q+N G++ ++  +PIS+ VQI  I +IT +   SV+AG+ +
Sbjct: 196 FAILGTLFGIATTLGLSVTQINAGINYLWPSIPISINVQIIAIAIITGLAICSVVAGLDK 255

Query: 254 GMKRLSEWNMLLSVVLVVLILLLGPTRYIINLMLESTGDYASHVVGLSFWSDTQKDSGWQ 313
           G+K LS  NM+L++ L++ + L+GP+ +I+   L++TG Y ++++  +F       S W 
Sbjct: 256 GVKNLSLLNMVLAIGLMLFVFLVGPSIFILETFLQNTGSYLNNIIERTFNLQAYSRSDWI 315

Query: 314 NWWTAFYWPWWMTWGPFVGLFIARISKGRSIRELIAGALLVPTLVTIIWMSVFGGTALKA 373
             WT F + W + W PFVGLFIA+IS+GR+IR+ + G + VPT+ T +W SVFG TAL  
Sbjct: 316 GNWTLFIFGWTIAWSPFVGLFIAKISRGRTIRQFVFGVMFVPTIFTFLWFSVFGDTAL-- 373

Query: 374 EQLDRQQHAELVASGELQGDKAKYEGGTVLLATKQETTA-AMFTLLHKIDAGTLGKVLSV 432
                  H  +V            EG T L++  Q   A A+F L   +    L  + S 
Sbjct: 374 -------HMIMV------------EGYTSLISDVQADNAIALFKLFELL---PLTSIASF 411

Query: 433 LVCILLATYFITSADSGTQVLCTLNSMGSANPPQSIRLLWCILEGAIAMALLMAGGLKAI 492
           L  +L+ T+F+TS+DSG+ V+ +L + G+ + P   R+ W  +EG +A  LL+AGGL A+
Sbjct: 412 LAVVLIITFFVTSSDSGSLVIDSLAAGGALHTPVWQRVFWASIEGIVASTLLLAGGLSAL 471

Query: 493 QMASIAAGLPIAGFILLISYTLMRSL 518
           Q  +IA+ LP A  +++ +  + R+L
Sbjct: 472 QTMTIASALPFAIIMMIAALGMWRAL 497