Pairwise Alignments

Query, 567 a.a., Choline/carnitine/betaine transporter family protein from Pseudomonas putida KT2440

Subject, 706 a.a., transporter protein from Sinorhizobium meliloti 1021

 Score =  413 bits (1061), Expect = e-119
 Identities = 208/513 (40%), Positives = 319/513 (62%), Gaps = 23/513 (4%)

Query: 11  LNPTVTIWSLLAVVAFVLFCALFAEHAAAVFQRASDFILQNFKWFYLISVTGVLGLLIYL 70
           +N  V + S+  +  FV    +  + A ++F      IL  F W YL+SV   L  +++L
Sbjct: 53  VNLPVFVGSVAVIALFVGIGVIAPKRAESIFSGMQTAILSGFGWLYLLSVAVFLFSMLFL 112

Query: 71  MCSKFGSMKLGRDDDKPEFSFGSWIAMLFSGGMGIGLIFWSVAEPMWHYAGNPFATGLTD 130
             S++G +KLG DD +PEF + SWIAMLF+ GMGIGL++++V EPM H+A  P A  LT 
Sbjct: 113 AFSRYGELKLGPDDSEPEFRYLSWIAMLFAAGMGIGLMYFAVGEPMTHFASPPEAEPLTI 172

Query: 131 EAATTAMRITLFHWGLHPWAIFTIVGLGLAYFAYRKGLPLSMRSILYPLIGERIYGPIGH 190
            A   AM +T FHWG+H WAI+++VGL LAYF YR  LPL++RS LYPL+ E I+GPIGH
Sbjct: 173 AAQREAMSVTFFHWGVHAWAIYSVVGLSLAYFGYRYNLPLTVRSGLYPLLKEGIHGPIGH 232

Query: 191 VVDILAVVITAFGVSQSLGLGVVQMNTGLSQVFDLPISLGVQITLIVLITLVTTVSVMAG 250
           VVDI A+  T FG++ SLG G++Q+N+GL+ +  +P S+ VQ+ L+ ++T + T+SV+ G
Sbjct: 233 VVDIFAICGTMFGLATSLGFGILQINSGLNYLLGIPQSIYVQLLLVTVVTAIATISVVTG 292

Query: 251 VSRGMKRLSEWNMLLSVVLVVLILLLGPTRYIINLMLESTGDYASHVVGLSFWSDTQKDS 310
           V +G++ LSE N+ L+V+L++ +L++GPT  ++   +++ G Y   +V  +F     +  
Sbjct: 293 VEKGVRILSETNLFLAVLLMLFVLVVGPTGTLMRDFVQNIGLYLDSLVLRTFNIYAYEPR 352

Query: 311 GWQNWWTAFYWPWWMTWGPFVGLFIARISKGRSIRELIAGALLVPTLVTIIWMSVFGGTA 370
            W + WT FYW WW++W PFVG+FIARIS+GR++RE +   L VP + T +WM+VFG TA
Sbjct: 353 PWIDSWTLFYWAWWISWSPFVGMFIARISRGRTVREFVTAVLFVPAMFTFLWMTVFGNTA 412

Query: 371 LKAEQLDRQQHAELVASGELQGDKAKYEGGTVLLATKQETTAAMFTLLHKIDAGTLGKVL 430
           +  +          +A+GEL  D             K + + A+F     +       V 
Sbjct: 413 IYVD--------TTIANGELARD------------VKADLSVALFQFFEYL---PWPAVT 449

Query: 431 SVLVCILLATYFITSADSGTQVLCTLNSMGSANPPQSIRLLWCILEGAIAMALLMAGGLK 490
           S L  +L++ +F+TS+DSG+ V+ T+ S G    P   R+ WC L G +A  LL  GGL 
Sbjct: 450 STLAVLLVSIFFVTSSDSGSLVIDTIASGGETATPALQRIFWCSLSGIVAAVLLSTGGLT 509

Query: 491 AIQMASIAAGLPIAGFILLISYTLMRSLRQEMA 523
           A+Q A+I+  LP +  +L++ ++L   +R ++A
Sbjct: 510 ALQSATISTALPFSLVMLILVWSLFVGMRADLA 542