Pairwise Alignments

Query, 466 a.a., dihydrolipoyl dehydrogenase from Pseudomonas putida KT2440

Subject, 475 a.a., pyruvate dehydrogenase complex, E3 component, lipoamide dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  339 bits (869), Expect = 1e-97
 Identities = 187/457 (40%), Positives = 278/457 (60%), Gaps = 4/457 (0%)

Query: 6   VVIIGGGPGGYNAAIRAGQLGLSVACVEGRSTLGGTCLNVGCMPSKALLHASELYEAASG 65
           VV++G GP GY+AA RA  LGL    VE  STLGG CLNVGC+PSKALLH +++ E A  
Sbjct: 9   VVVLGAGPAGYSAAFRAADLGLETVIVERFSTLGGVCLNVGCIPSKALLHVAKVIEEAKA 68

Query: 66  DEFAHLGIEVKPTLNLAQMMKQKDESVTGLTKGIEYLFRKNKVEWIKGWGRLDGIGKVVV 125
              AH  +  +PT++L ++   K + ++ LT G+  + +  KV  + G+G+  G   + V
Sbjct: 69  VA-AHGVVFGEPTIDLDKLRSFKQKVISQLTGGLGGMSKMRKVNVVNGFGKFSGPNSLEV 127

Query: 126 KAEDGSETALQAKDIVIATGSEPTPLPGVTVDNQRIIDSTGALSLPQVPKHLVVIGAGVI 185
            AEDG+ T ++    +IA GS P  LP +  ++ RI DST AL L +VP  L+V+G G+I
Sbjct: 128 TAEDGTVTVVKFDQAIIAAGSRPIKLPFIPHEDPRIWDSTDALELKEVPGKLLVMGGGII 187

Query: 186 GLELGSVWRRLGSQVTVIEYLDRICPGTDTETAKTLQKALAKQGMVFKLGSKVTQATAGA 245
           GLE+G+V+  LGS++ V+E  D++ P  D +  +   K + K+  +  L +KVT   A  
Sbjct: 188 GLEMGTVYSSLGSEIDVVEMFDQVIPAADKDVVRVFTKQIKKKFNLI-LETKVTAVEARE 246

Query: 246 DGVSLTLEPAAGGTAESLQADYVLVAIGRRPYTKGLNLESVGLEADKRGMLN-NEHHRTS 304
           DG+ +++E      AE ++ D VLVAIGR P  K ++ E  G++ D+RG +N ++  RT+
Sbjct: 247 DGIYVSME-GKSAPAEPVRYDAVLVAIGRTPNGKLIDAEKAGVKIDERGFINVDKQLRTN 305

Query: 305 VPGVWVIGDVTSGPMLAHKAEDEAVACIERIAGKPHEVNYNLIPGVIYTRPEMATVGKTE 364
           VP ++ IGD+   PMLAHK   E     E IAG  H  +  +IP + YT PE+A VG TE
Sbjct: 306 VPHIYAIGDIVGQPMLAHKGVHEGHVAAEVIAGMKHYFDPKVIPSIAYTDPEVAWVGLTE 365

Query: 365 EQLKAEGRAYKVGKFPFTANSRAKINHETEGFAKVIADAETDEVLGVHLVGPSVSEMIGE 424
           ++ K +G AY+   FP+ A+ RA  +  +EG  K+I D +T  V+G  +VG +  E++GE
Sbjct: 366 KEAKEQGIAYETATFPWAASGRAIASDCSEGMTKLIFDKDTHRVIGGAIVGVNGGELLGE 425

Query: 425 FCVAMEFSASAEDIALTCHPHPTRSEALRQAAMNVDG 461
             +A+E    AED+ALT H HPT  E++  AA   +G
Sbjct: 426 IGLAIEMGCDAEDLALTIHAHPTLHESVGLAAEIYEG 462



 Score = 26.9 bits (58), Expect = 0.001
 Identities = 37/147 (25%), Positives = 56/147 (38%), Gaps = 42/147 (28%)

Query: 172 QVPKHLVVIGAGVIGLELGSVWRRLGSQVTVIE---YLDRICPGTDTETAKTL------- 221
           ++   +VV+GAG  G         LG +  ++E    L  +C       +K L       
Sbjct: 4   EIKTQVVVLGAGPAGYSAAFRAADLGLETVIVERFSTLGGVCLNVGCIPSKALLHVAKVI 63

Query: 222 --QKALAKQGMVF--------KLGS----KVTQATAGADGVSL----------------- 250
              KA+A  G+VF        KL S     ++Q T G  G+S                  
Sbjct: 64  EEAKAVAAHGVVFGEPTIDLDKLRSFKQKVISQLTGGLGGMSKMRKVNVVNGFGKFSGPN 123

Query: 251 TLE-PAAGGTAESLQADYVLVAIGRRP 276
           +LE  A  GT   ++ D  ++A G RP
Sbjct: 124 SLEVTAEDGTVTVVKFDQAIIAAGSRP 150